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PLM1_100_b1_sep16_scaffold_640

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_640_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2..400)
-----------------
DNA (399bp)
protein (133aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Arthrobacter sp. SJCon genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_640_2
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

533..1831
-----------------
DNA (1299bp)
protein (433aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Marichromatium purpuratum genus=Marichromatium taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Chloroflexi_48_8_curated
PLM1_100_b1_sep16_scaffold_640_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2159..3592)
-----------------
DNA (1434bp)
protein (478aa)
O-antigen polymerase bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_640_4
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3747..4655)
-----------------
DNA (909bp)
protein (303aa)
Sulfotransferase family protein Tax=Gloeocapsa sp. PCC 73106 RepID=L8LJD0_9CHRO
Sulfotransferase family protein {ECO:0000313|EMBL:ELR96305.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
sulfotransferase family protein
PLM1_100_b1_sep16_scaffold_640_5
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(4757..5608)
-----------------
DNA (852bp)
protein (284aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVU3_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ90746.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM1_100_b1_sep16_scaffold_640_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5608..6822)
-----------------
DNA (1215bp)
protein (405aa)
Glycosyl transferase, family II bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Glycosyl transferase, family 2
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_640_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(6819..8102)
-----------------
DNA (1284bp)
protein (428aa)
Glycosyl transferase group 1 bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
group 1 glycosyl transferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM1_100_b1_sep16_scaffold_640_8
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(8584..9780)
-----------------
DNA (1197bp)
protein (399aa)
hypothetical protein Tax=Hymenobacter norwichensis RepID=UPI0003B5451F
hypothetical protein
Tax=RBG_13_Chloroflexi_56_8_curated
PLM1_100_b1_sep16_scaffold_640_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9788..11479)
-----------------
DNA (1692bp)
protein (564aa)
id=2512900 bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_640_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11497..12780)
-----------------
DNA (1284bp)
protein (428aa)
Capsular exopolysaccharide family bin=GWC2_Chloroflexi_73_18 species=unknown genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
wcoI; capsular polysaccharide synthesis enzyme
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_640_11
unknown

Not on your lists

12916..13164
-----------------
DNA (249bp)
protein (83aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_640_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13177..14133)
-----------------
DNA (957bp)
protein (319aa)
NDP-sugar oxidoreductase Tax=Sorangium cellulosum (strain So ce56) RepID=A9EYI4_SORC5
NDP-sugar oxidoreductase
NDP-sugar oxidoreductase {ECO:0000313|EMBL:CAN97546.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM1_100_b1_sep16_scaffold_640_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(14135..15058)
-----------------
DNA (924bp)
protein (308aa)
alkaline phosphatase (EC:3.1.3.1)
Alkaline phosphatase Tax=Micromonospora sp. ATCC 39149 RepID=C4RJ09_9ACTO
Tax=RBG_16_Chloroflexi_63_12_curated
PLM1_100_b1_sep16_scaffold_640_14
unknown

Not on your lists

15335..15601
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_640_15
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15986..17173
-----------------
DNA (1188bp)
protein (396aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003640CB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB31064.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_640_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18148..18546)
-----------------
DNA (399bp)
protein (133aa)
LexA family transcriptional repressor (EC:3.4.21.88)
LexA repressor Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WWW9_ALIAD
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 16 items

View Taxonomy