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PLM1_100_b1_sep16_scaffold_758

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_758_1
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52..1854)
-----------------
DNA (1803bp)
protein (601aa)
glycosyl hydrolase family 15 Tax=Streptomyces prunicolor RepID=UPI00036F6F30
Glycosyl hydrolase family 15 {ECO:0000313|EMBL:EYT82425.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
glycosyl hydrolase
PLM1_100_b1_sep16_scaffold_758_2
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1901..2314)
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein Tax=Longispora albida RepID=UPI000360EAF6
Tannase and feruloyl esterase
Tannase and feruloyl esterase {ECO:0000313|EMBL:AHY45898.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM1_100_b1_sep16_scaffold_758_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2432..2911
-----------------
DNA (480bp)
protein (160aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A2X0_THECD
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_4
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

3411..6122
-----------------
DNA (2712bp)
protein (904aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
hypothetical protein Tax=Thioalkalivibrio sp. AKL8 RepID=UPI00036B9710
histidine kinase
PLM1_100_b1_sep16_scaffold_758_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6115..7527
-----------------
DNA (1413bp)
protein (471aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B34B39
peptidase M23
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_trna_1
unknown

Not on your lists

comp(7680..7754)
-----------------
DNA (75bp)
transferRNA Pro
PLM1_100_b1_sep16_scaffold_758_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7772..8071)
-----------------
DNA (300bp)
protein (100aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(8238..10883)
-----------------
DNA (2646bp)
protein (882aa)
proS; prolyl-tRNA synthetase (ProRS) (EC:6.1.1.15) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
prolyl-tRNA synthetase (EC:6.1.1.15)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10929..12146)
-----------------
DNA (1218bp)
protein (406aa)
Peptidase M50 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F067_CONWI
metalloprotease RseP
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12143..13210)
-----------------
DNA (1068bp)
protein (356aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Patulibacter medicamentivorans RepID=H0E777_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13207..14043)
-----------------
DNA (837bp)
protein (279aa)
Phosphatidate cytidylyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F070_CONWI
phosphatidate cytidylyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14040..14789)
-----------------
DNA (750bp)
protein (250aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW64_RUBXD
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14793..15353)
-----------------
DNA (561bp)
protein (187aa)
Ribosome-recycling factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15350..16123)
-----------------
DNA (774bp)
protein (258aa)
uridylate kinase (EC:2.7.4.22)
uridylate kinase Tax=Patulibacter americanus RepID=UPI0003B4720C
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16120..16920)
-----------------
DNA (801bp)
protein (267aa)
Elongation factor Ts Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IXM4_RAHAC
translation elongation factor Ts
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


comp(16917..17702)
-----------------
DNA (786bp)
protein (262aa)
30S ribosomal protein S2 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNL2_CLOSH
rpsB; 30S ribosomal protein S2
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_16
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17846..18634
-----------------
DNA (789bp)
protein (263aa)
diguanylate cyclase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Diguanylate cyclase {ECO:0000313|EMBL:EMP54652.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter santoriniensis NKSG1.;"
response regulator receiver modulated diguanylate cyclase
PLM1_100_b1_sep16_scaffold_758_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18631..19512)
-----------------
DNA (882bp)
protein (294aa)
Pseudouridine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F076_CONWI
pseudouridine synthase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19526..20044)
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000369E77E
lipoprotein signal peptidase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_19
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20113..20478)
-----------------
DNA (366bp)
protein (122aa)
Transcriptional regulator, TraR/DksA family Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CWL7_HALOH
TraR/DksA family transcriptional regulator
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_758_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20501..20983)
-----------------
DNA (483bp)
protein (161aa)
DivIVA domain protein Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX83_MAHA5
DivIVA domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21015..21317)
-----------------
DNA (303bp)
protein (101aa)
cell division protein ZapA Tax=Patulibacter americanus RepID=UPI0003B69585
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21336..21869)
-----------------
DNA (534bp)
protein (178aa)
Cell division protein SepF Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F080_CONWI
hypothetical protein
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_758_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21933..22544)
-----------------
DNA (612bp)
protein (204aa)
Pyridoxal phosphate enzyme, YggS family Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3M5_9FIRM
alanine racemase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_758_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(22528..23247)
-----------------
DNA (720bp)
protein (240aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E790_9ACTN
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_758_25
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23244..23870)
-----------------
DNA (627bp)
protein (209aa)
Peptidase M50 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ60_ALKOO
peptidase M50
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_758_26
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23871..26096)
-----------------
DNA (2226bp)
protein (742aa)
Putative poly A polymerase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NF3_SYMTH
poly A polymerase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_758_27
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

26486..29506
-----------------
DNA (3021bp)
protein (1007aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I551_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM00389.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM1_100_b1_sep16_scaffold_758_28
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29784..31097)
-----------------
DNA (1314bp)
protein (438aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Bradyrhizobium sp. WSM471 RepID=H5Y6Q3_9BRAD
PLM1_100_b1_sep16_scaffold_758_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

31158..31721
-----------------
DNA (564bp)
protein (188aa)
Metal dependent phosphohydrolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARW7_RUBXD
HDIG: uncharacterized domain HDIG
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying items 1-30 of 32 in total

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