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PLM1_100_b1_sep16_scaffold_783

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_783_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2..184)
-----------------
DNA (183bp)
protein (61aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_783_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(486..809)
-----------------
DNA (324bp)
protein (108aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(866..1579)
-----------------
DNA (714bp)
protein (238aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_4
unknown

Not on your lists

comp(1564..2667)
-----------------
DNA (1104bp)
protein (368aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_783_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2670..3563)
-----------------
DNA (894bp)
protein (298aa)
Binding-protein-dependent transport systems inner membrane component Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBU2_CONWI
binding-protein-dependent transporters inner membrane component
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3563..6205)
-----------------
DNA (2643bp)
protein (881aa)
Binding-protein-dependent transport systems inner membrane component Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBU1_CONWI
binding-protein-dependent transporters inner membrane component
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6202..7434)
-----------------
DNA (1233bp)
protein (411aa)
ABC transporter related protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBT9_CONWI
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB51354.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_783_8
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7498..8559
-----------------
DNA (1062bp)
protein (354aa)
Isocitrate dehydrogenase (NADP(+)) {ECO:0000313|EMBL:EGK11813.1}; EC=1.1.1.42 {ECO:0000313|EMBL:EGK11813.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
Isocitrate dehydrogenase (NADP(+)) Tax=Desmospora sp. 8437 RepID=F5SFD8_9BACL
isocitrate/isopropylmalate dehydrogenase
PLM1_100_b1_sep16_scaffold_783_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8556..9674
-----------------
DNA (1119bp)
protein (373aa)
Major facilitator superfamily protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VSY7_9ACTO
major facilitator superfamily protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_10
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9671..9985)
-----------------
DNA (315bp)
protein (105aa)
ferredoxin Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4E014
4Fe-4S ferredoxin
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_783_11
unknown

Not on your lists

comp(9997..10305)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_783_12
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10348..10692
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1VHH3_DESVV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS94567.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
PLM1_100_b1_sep16_scaffold_783_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10655..11359)
-----------------
DNA (705bp)
protein (235aa)
Cytochrome biogenesis protein Tax=Nitrolancetus hollandicus Lb RepID=I4EDD9_9CHLR
Cytochrome biogenesis protein {ECO:0000313|EMBL:CCF82701.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
cytochrome C biogenesis protein transmembrane region
PLM1_100_b1_sep16_scaffold_783_14
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11372..11845)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein Tax=Wenxinia marina RepID=UPI000372A406
Wenxma_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ68936.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
cytochrome C biogenesis protein
PLM1_100_b1_sep16_scaffold_783_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11842..12399)
-----------------
DNA (558bp)
protein (186aa)
redoxin domain-containing protein bin=bin9_gal15 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
redoxin domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12413..13336)
-----------------
DNA (924bp)
protein (308aa)
ErfK/YbiS/YcfS/YnhG Tax=Patulibacter medicamentivorans RepID=H0E3H3_9ACTN
ErfK/YbiS/YcfS/YnhG family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_17
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13733..15262)
-----------------
DNA (1530bp)
protein (510aa)
Spermine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F013_CONWI
spermine synthase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_783_18
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15434..18196)
-----------------
DNA (2763bp)
protein (921aa)
Stage II sporulation E family protein Tax=Chloroflexus RepID=A9WIU0_CHLAA
stage II sporulation E family protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
PLM1_100_b1_sep16_scaffold_783_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18207..18455
-----------------
DNA (249bp)
protein (83aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18455..18904
-----------------
DNA (450bp)
protein (150aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_21
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18825..19379)
-----------------
DNA (555bp)
protein (185aa)
Membrane-associated phospholipid phosphatase bin=GWB2_Proteobacteria_55_19 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Deltaproteobacteria_55_19_curated
PLM1_100_b1_sep16_scaffold_783_22
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19397..19993)
-----------------
DNA (597bp)
protein (199aa)
histidine kinase Tax=Desulfospira joergensenii RepID=UPI0003B327FB
response regulator receiver protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM1_100_b1_sep16_scaffold_783_23
unknown

Not on your lists

comp(20037..20291)
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_783_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20294..20608)
-----------------
DNA (315bp)
protein (105aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20605..21132)
-----------------
DNA (528bp)
protein (176aa)
Putative uncharacterized protein Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C4V3_THENR
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21089..21451)
-----------------
DNA (363bp)
protein (121aa)
Septum formation initiator Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF1_CONWI
septum formation initiator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_27
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21493..22911)
-----------------
DNA (1419bp)
protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
Pyruvate kinase Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WSS5_KYRT2
pyruvate kinase
PLM1_100_b1_sep16_scaffold_783_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23004..24209)
-----------------
DNA (1206bp)
protein (402aa)
enolase (EC:4.2.1.11)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Enolase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF2_CONWI
PLM1_100_b1_sep16_scaffold_783_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(24275..25039)
-----------------
DNA (765bp)
protein (255aa)
MazG family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEF3_CONWI
MazG family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_783_30
unknown

Not on your lists

comp(25211..25330)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

Displaying 30 items

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