ggKbase home page

PLM1_100_b1_sep16_scaffold_15386

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_15386_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..535)
-----------------
DNA (534bp)
protein (178aa)
Protease-associated PA domain protein Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AYV9_HERA2
protease domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_15386_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1060..1539)
-----------------
DNA (480bp)
protein (160aa)
DNA polymerase III, alpha subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0G3_CONWI
DNA polymerase III subunit alpha
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_15386_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1506..4355)
-----------------
DNA (2850bp)
protein (950aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I3G4_DESAP
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_15386_4
unknown

Not on your lists

comp(4456..5016)
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_15386_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

5401..5595
-----------------
DNA (195bp)
protein (65aa)
Translation initiation factor IF-1 Tax=Patulibacter medicamentivorans RepID=H0E8N3_9ACTN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
translation initiation factor IF-1
PLM1_100_b1_sep16_scaffold_15386_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5602..7491
-----------------
DNA (1890bp)
protein (630aa)
UvrD/REP helicase bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
UvrD/REP helicase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_15386_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7537..7881)
-----------------
DNA (345bp)
protein (115aa)
Putative uncharacterized protein bin=GWA2_CPR4_42_17 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM1_100_b1_sep16_scaffold_15386_8
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8059..8427
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WPY0_MYCKA
Uncharacterized protein {ECO:0000313|EMBL:ETW25851.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
hypothetical protein
Displaying 8 items

View Taxonomy