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PLM1_100_b1_sep16_scaffold_2648

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2648_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(1..1578)
-----------------
DNA (1578bp)
protein (526aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
GMP synthase [glutamine-hydrolyzing] Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXU4_RUBXD
PLM1_100_b1_sep16_scaffold_2648_2
Lactobacillus melliventris, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(1580..2719)
-----------------
DNA (1140bp)
protein (380aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964};; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus melliventris.;"
Inosine-5'-monophosphate dehydrogenase Tax=Lactobacillus amylovorus (strain GRL 1118) RepID=F2M144_LACAL
inosine-5-monophosphate dehydrogenase
PLM1_100_b1_sep16_scaffold_2648_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2751..3704)
-----------------
DNA (954bp)
protein (318aa)
1-phosphofructokinase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F319_CONWI
1-phosphofructokinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2648_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(3701..4852)
-----------------
DNA (1152bp)
protein (384aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein Tax=Firmicutes bacterium ASF500 RepID=V2ZFD7_9FIRM
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2648_5
unknown

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4875..5189
-----------------
DNA (315bp)
protein (105aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2648_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(5210..5554)
-----------------
DNA (345bp)
protein (115aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E0G9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN12830.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
tagH; teichoic acid ABC transporter ATP-binding protein TagH
PLM1_100_b1_sep16_scaffold_2648_7
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(5548..6477)
-----------------
DNA (930bp)
protein (310aa)
Orotidine 5'-phosphate decarboxylase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R869_PIRSD
orotidine 5'-phosphate decarboxylase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_2648_8
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6661..8334)
-----------------
DNA (1674bp)
protein (558aa)
DNA polymerase III, subunit epsilon (EC:2.7.7.7)
DNA polymerase III, epsilon subunit Tax=Micromonospora sp. (strain L5) RepID=E8S4J8_MICSL
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:EWM68432.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
PLM1_100_b1_sep16_scaffold_2648_9
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(8463..9110)
-----------------
DNA (648bp)
protein (216aa)
pyrE-1; orotate phosphoribosyltransferase (EC:2.4.2.10)
hypothetical protein Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI00038129AF
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_2648_10
unknown

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comp(9107..9307)
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2648_11
unknown

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comp(9297..9704)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2648_12
Planococcus halocryophilus, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9934..10728
-----------------
DNA (795bp)
protein (265aa)
Putative ribonuclease BN Tax=Planococcus donghaensis MPA1U2 RepID=E7RGA5_9BACL
Ribonuclease BN {ECO:0000313|EMBL:EMF46074.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus halocryophilus Or1.;"
putative ribonuclease BN
PLM1_100_b1_sep16_scaffold_2648_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(10736..11158)
-----------------
DNA (423bp)
protein (141aa)
Transcriptional regulator, Crp/Fnr family bin=GWC2_Chloroflexi_73_18 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Crp/Fnr family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2648_14
Bdellovibrio bacteriovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11168..11620)
-----------------
DNA (453bp)
protein (151aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio bacteriovorus W.;"
Non-canonical purine NTP pyrophosphatase Tax=Caldicellulosiruptor RepID=E4S485_CALKI
putative HAM1 protein
Displaying 14 items

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