ggKbase home page

PLM1_100_b1_sep16_scaffold_2710

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2710_1
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..386)
-----------------
DNA (384bp)
protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JYR8_HYPDA
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADJ23520.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
PLM1_100_b1_sep16_scaffold_2710_2
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(383..1198)
-----------------
DNA (816bp)
protein (272aa)
polysaccharide deacetylase bin=GWD2_Chloroflexi_49_16 species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
polysaccharide deacetylase family protein
Tax=GWC2_Chloroflexi_49_37_curated
PLM1_100_b1_sep16_scaffold_2710_3
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1195..2703)
-----------------
DNA (1509bp)
protein (503aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00037096AD
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADH69050.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM1_100_b1_sep16_scaffold_2710_4
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(2694..3617)
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B545E8
phosphotransferase domain-containing protein
Tax=CG_Omnitr_02
PLM1_100_b1_sep16_scaffold_2710_5
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

3681..4889
-----------------
DNA (1209bp)
protein (403aa)
Integrase catalytic region Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BIY4_MEISD
Integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:ADH65140.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
PLM1_100_b1_sep16_scaffold_2710_6
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5192..5809
-----------------
DNA (618bp)
protein (206aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY48360.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
ABC transporter permease; K02054 putative spermidine/putrescine transport system permease protein bin=bin8_Chloro species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
PLM1_100_b1_sep16_scaffold_2710_7
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5806..6591
-----------------
DNA (786bp)
protein (262aa)
ABC-type spermidine/putrescine transport system, permease component II Tax=Acidiphilium sp. PM RepID=F7S4R4_9PROT
Putative ABC-type transport system, permease component {ECO:0000313|EMBL:CDW92834.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
putative ABC transporter permease
PLM1_100_b1_sep16_scaffold_2710_8
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6591..7697
-----------------
DNA (1107bp)
protein (369aa)
ABC transporter related protein Tax=Acidiphilium RepID=A5FX67_ACICJ
putative ABC transporter ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ABQ30199.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
PLM1_100_b1_sep16_scaffold_2710_9
marine actinobacterium MedAcidi-G1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7651..8253)
-----------------
DNA (603bp)
protein (201aa)
ugpQ; putative glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Putative glycerophosphoryl diester phosphodiesterase Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZXA7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KIE50945.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G1.;"
PLM1_100_b1_sep16_scaffold_2710_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

8890..9732
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein bin=bin8_Chloro species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM1_100_b1_sep16_scaffold_2710_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9843..11285
-----------------
DNA (1443bp)
protein (481aa)
aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Aminobutyraldehyde dehydrogenase {ECO:0000313|EMBL:ADB51020.1}; EC=1.2.1.19 {ECO:0000313|EMBL:ADB51020.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Aminobutyraldehyde dehydrogenase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8Q6_CONWI
PLM1_100_b1_sep16_scaffold_2710_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11315..12406
-----------------
DNA (1092bp)
protein (364aa)
spermidine/putrescine ABC transporter ATPase; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] bin=bin8_Chloro species=Acidocella sp. MX-AZ02 genus=Acidocella taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
polyamine ABC transporter ATP-binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2710_13
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12403..12888
-----------------
DNA (486bp)
protein (162aa)
ABC transporter polyamine-binding lipoprotein Tax=Streptomyces sp. C RepID=D9W0X0_9ACTO
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJE42772.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
Putrescine ABC transporter putrescine-binding protein PotF
Displaying 13 items

View Taxonomy