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PLM1_100_b1_sep16_scaffold_2755

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2755_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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135..605
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
4-hydroxybenzoyl-CoA thioesterase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2755_2
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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602..1060
-----------------
DNA (459bp)
protein (153aa)
GAF sensor protein; K07170 GAF domain-containing protein bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
GAF sensor protein
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM1_100_b1_sep16_scaffold_2755_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1180..3390)
-----------------
DNA (2211bp)
protein (737aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ0_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2755_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(3425..5287)
-----------------
DNA (1863bp)
protein (621aa)
Single-stranded-DNA-specific exonuclease RecJ Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY9_CONWI
single-stranded-DNA-specific exonuclease RecJ
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_2755_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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5365..5784
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2E3_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_2755_6
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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comp(5844..8015)
-----------------
DNA (2172bp)
protein (724aa)
Putative PA domain-containing protein (Precursor) bin=bin3_NC10 species=Streptomyces viridochromogenes genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
Tax=RBG_16_Chloroflexi_52_11_curated
PLM1_100_b1_sep16_scaffold_2755_7
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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comp(8188..9039)
-----------------
DNA (852bp)
protein (284aa)
Uncharacterized protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KJF8_9ACTO
Tax=RBG_16_Chloroflexi_52_11_curated
PLM1_100_b1_sep16_scaffold_2755_8
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(9036..10250)
-----------------
DNA (1215bp)
protein (405aa)
UPI0003D875D5 related cluster Tax=unknown RepID=UPI0003D875D5
Hypothetical Protein
Tax=RBG_16_Chloroflexi_52_11_curated
PLM1_100_b1_sep16_scaffold_2755_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10378..10866)
-----------------
DNA (489bp)
protein (163aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY4_CONWI
Holliday junction DNA helicase RuvB
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2755_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11446..12015)
-----------------
DNA (570bp)
protein (190aa)
Holliday junction ATP-dependent DNA helicase RuvA Tax=Eggerthella sp. CAG:298 RepID=R7AFV9_9ACTN
Holliday junction DNA helicase RuvA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2755_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(12012..12509)
-----------------
DNA (498bp)
protein (166aa)
Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC Tax=Patulibacter medicamentivorans RepID=H0EAW7_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2755_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12551..13306)
-----------------
DNA (756bp)
protein (252aa)
Probable transcriptional regulatory protein Rxyl_1318 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Y1318_RUBXD
TIGR01033: DNA-binding regulatory protein, YebC/PmpR family
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_2755_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13293..13847)
-----------------
DNA (555bp)
protein (185aa)
glutamine amidotransferase Tax=Thermus scotoductus RepID=UPI000374698F
Glutamine amidotransferase subunit pdxT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2755_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13856..14740)
-----------------
DNA (885bp)
protein (295aa)
Pyridoxal biosynthesis lyase PdxS Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWE8_RUBXD
pyridoxal biosynthesis lyase PdxS
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2755_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14754..16574)
-----------------
DNA (1821bp)
protein (607aa)
Methylenetetrahydrofolate reductase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LH90_9BACT
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2755_16
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(16594..17628)
-----------------
DNA (1035bp)
protein (345aa)
Uncharacterized protein Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VIY4_RHILT
hypothetical protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM1_100_b1_sep16_scaffold_2755_trna_1
unknown

Not on your lists

comp(17764..17836)
-----------------
DNA (73bp)
transferRNA Met
Displaying 17 items

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