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PLM1_100_b1_sep16_scaffold_2876

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2876_1
unknown

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3..137
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2876_2
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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176..1294
-----------------
DNA (1119bp)
protein (373aa)
Bile acid-inducible L-carnitine dehydratase protein F Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WJC3_9EURY
Bile acid-inducible L-carnitine dehydratase protein F {ECO:0000313|EMBL:ELY49580.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens JCM 14089.;"
putative acyl-CoA transferase/carnitine dehydratase
PLM1_100_b1_sep16_scaffold_2876_3
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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1361..2161
-----------------
DNA (801bp)
protein (267aa)
squalene synthase (EC:2.5.1.32)
Squalene synthase HpnC {ECO:0000313|EMBL:ADP83905.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ADP83905.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
squalene synthase Tax=Frankia sp. BMG5.12 RepID=UPI000360D68E
PLM1_100_b1_sep16_scaffold_2876_4
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2158..2991
-----------------
DNA (834bp)
protein (278aa)
hopD; squalene/phytoene synthase (EC:2.5.1.32)
Phytoene synthase Tax=Saccharopolyspora erythraea PF4_SACER">RepID=T2RPF4_SACER
Phytoene synthase {ECO:0000313|EMBL:EQD82226.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
PLM1_100_b1_sep16_scaffold_2876_5
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2988..4232
-----------------
DNA (1245bp)
protein (415aa)
phytoene desaturase (EC:1.-.-.-)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI000375A4D6
Squalene-associated FAD-dependent desaturase {ECO:0000313|EMBL:EHR50915.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
PLM1_100_b1_sep16_scaffold_2876_6
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4229..6079
-----------------
DNA (1851bp)
protein (617aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036A2CA5
Squalene-hopene cyclase {ECO:0000313|EMBL:KFF95949.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
putative squalene--hopene cyclase
PLM1_100_b1_sep16_scaffold_2876_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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6076..6963
-----------------
DNA (888bp)
protein (296aa)
NAD-dependent dehydratase Tax=Pandoraea sp. B-6 RepID=UPI000345C9AA
NAD-dependent dehydratase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM1_100_b1_sep16_scaffold_2876_8
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6960..7958
-----------------
DNA (999bp)
protein (333aa)
Hopanoid biosynthesis associated radical SAM protein HpnH Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R5V5_ISOPI
hopanoid biosynthesis associated radical SAM protein HpnH
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:ADV62862.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
PLM1_100_b1_sep16_scaffold_2876_9
unknown

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7943..8524
-----------------
DNA (582bp)
protein (194aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2876_10
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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8521..9447
-----------------
DNA (927bp)
protein (309aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034C5004
PLM1_100_b1_sep16_scaffold_2876_11
S_OP1_64_32, KB1, Bacteria

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9636..10160
-----------------
DNA (525bp)
protein (175aa)
pheA; prephenate dehydratase; K04518 prephenate dehydratase [EC:4.2.1.51] bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pheA; prephenate dehydratase
Tax=S_OP1_64_32
PLM1_100_b1_sep16_scaffold_2876_12
unknown

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comp(10191..10319)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2876_13
unknown

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comp(10301..10726)
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2876_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(10842..11759)
-----------------
DNA (918bp)
protein (306aa)
GCN5-related N-acetyltransferase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2H7_SPHTD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACZ38444.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_100_b1_sep16_scaffold_2876_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(11759..12319)
-----------------
DNA (561bp)
protein (187aa)
Thioredoxin Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZC5_CONWI
thioredoxin
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2876_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(12320..13174)
-----------------
DNA (855bp)
protein (285aa)
Histone deacetylase family protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXJ2_THERP
histone deacetylase family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2876_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(13171..13875)
-----------------
DNA (705bp)
protein (235aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.47)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) Tax=Chthonomonas calidirosea T49 RepID=S0ESB6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDM65356.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM1_100_b1_sep16_scaffold_2876_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(13868..14707)
-----------------
DNA (840bp)
protein (280aa)
5'-3' exonuclease, N-terminal resolvase-like domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2X8_CONWI
DNA polymerase I
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_2876_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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14710..16947
-----------------
DNA (2238bp)
protein (746aa)
DNA topoisomerase {ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|SAAS:SAAS00046608};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA topoisomerase III Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F254_CONWI
DNA topoisomerase III
PLM1_100_b1_sep16_scaffold_2876_20
unknown

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18081..18170
-----------------
DNA (90bp)
protein (30aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_2876_21
RBG_16_Chloroflexi_50_11_curated, Chloroflexi, Bacteria

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comp(18167..18460)
-----------------
DNA (294bp)
protein (98aa)
HD domain protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KXP0_THERP
HD domain-containing protein
Tax=RBG_16_Chloroflexi_50_11_curated
Displaying 21 items

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