ggKbase home page

PLM1_100_b1_sep16_scaffold_2904

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_2904_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3..311
-----------------
DNA (309bp)
protein (103aa)
Nuclear export factor GLE1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2P4_CONWI
nuclear export factor GLE1
Nuclear export factor GLE1 {ECO:0000313|EMBL:ADB54175.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_2904_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(312..2138)
-----------------
DNA (1827bp)
protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F330_CONWI
glucosamine/fructose-6-phosphate aminotransferase
PLM1_100_b1_sep16_scaffold_2904_3
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2172..3458)
-----------------
DNA (1287bp)
protein (429aa)
Phosphoglucosamine mutase {ECO:0000255|HAMAP-Rule:MF_01554}; EC=5.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01554};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
Phosphoglucosamine mutase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=GLMM_PELTS
glmM; phosphoglucosamine mutase
PLM1_100_b1_sep16_scaffold_2904_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


comp(3459..3857)
-----------------
DNA (399bp)
protein (133aa)
30S ribosomal protein S9 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJI7_SYNLT
30S ribosomal protein S9
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_2904_5
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


comp(3857..4306)
-----------------
DNA (450bp)
protein (150aa)
50S ribosomal protein L13 Tax=Patulibacter medicamentivorans RepID=H0E0G3_9ACTN
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
50S ribosomal protein L13
PLM1_100_b1_sep16_scaffold_2904_6
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(4335..5588)
-----------------
DNA (1254bp)
protein (418aa)
major facilitator superfamily protein bin=bin8_Chloro species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
major facilitator transporter
Tax=CSP1_4_Chloroflexi
PLM1_100_b1_sep16_scaffold_2904_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5650..6000
-----------------
DNA (351bp)
protein (117aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037BE5BD
acylphosphatase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_2904_8
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5997..7043
-----------------
DNA (1047bp)
protein (349aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B33E00
LigA protein {ECO:0000313|EMBL:EWM17788.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_2904_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8071..8208)
-----------------
DNA (138bp)
protein (46aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
GMP synthase [glutamine-hydrolyzing] Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXU4_RUBXD
Displaying 9 items

View Taxonomy