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PLM1_100_b1_sep16_scaffold_3044

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_3044_1

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1..810
-----------------
DNA (810bp)
protein (270aa)
glycine reductase complex protein C large subunit (EC:2.7.-.-)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036803C5
Marine sediment metagenome DNA, contig: S06H3_S00040 {ECO:0000313|EMBL:GAI20593.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM1_100_b1_sep16_scaffold_3044_2
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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813..1139
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI0003727F8B
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio velox DSM 12556.;"
thioredoxin domain-containing protein
PLM1_100_b1_sep16_scaffold_3044_3
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1136..1264
-----------------
DNA (129bp)
protein (43aa)
grdA; glycine/sarcosine/betaine reductase complex protein A (EC:1.21.4.2 1.21.4.3 1.21.4.4)
Glycine/sarcosine/betaine reductase complex component A; EC=1.21.4.2;; EC=1.21.4.3;; EC=1.21.4.4;; Selenoprotein PA; Thioredoxin reductase complex selenoprotein A; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
Glycine/sarcosine/betaine reductase complex component A Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=GRDA_CARHZ
PLM1_100_b1_sep16_scaffold_3044_4
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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1280..1600
-----------------
DNA (321bp)
protein (107aa)
Glycine/sarcosine/betaine reductase protein A Tax=Photobacterium sp. AK15 RepID=L8JHE0_9GAMM
Glycine/sarcosine/betaine reductase protein A {ECO:0000313|EMBL:ELR66949.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK15.;"
putative glycine/sarcosine/betaine reductase complex protein A
PLM1_100_b1_sep16_scaffold_3044_5
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1597..2148)
-----------------
DNA (552bp)
protein (184aa)
DNA-3-methyladenine glycosylase 1 {ECO:0000313|EMBL:EXJ10804.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EXJ10804.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
DNA-3-methyladenine glycosylase I Tax=Thauera phenylacetica B4P RepID=N6Z4N5_9RHOO
DNA-3-methyladenine glycosidase I
PLM1_100_b1_sep16_scaffold_3044_6
Streptomyces iranensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2145..4139)
-----------------
DNA (1995bp)
protein (665aa)
hypothetical protein Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00035D19E6
Uncharacterized protein {ECO:0000313|EMBL:CDR01607.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces iranensis.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_3044_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(4132..4749)
-----------------
DNA (618bp)
protein (206aa)
Putative uncharacterized protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67MK8_SYMTH
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_3044_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(4899..5252)
-----------------
DNA (354bp)
protein (118aa)
Anti-sigma factor antagonist Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWD7_ACIC1
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_100_b1_sep16_scaffold_3044_9
Piscirickettsia salmonis, Piscirickettsia, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5342..5968)
-----------------
DNA (627bp)
protein (209aa)
hypothetical protein Tax=Piscirickettsia salmonis RepID=UPI0002E071A6
Hemolysin-type calcium-binding repeat family protein {ECO:0000313|EMBL:KGP95545.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Piscirickettsia.;" source="Piscirickettsia salmonis.;"
calcium-binding protein
PLM1_100_b1_sep16_scaffold_3044_trna_1
unknown

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6092..6162
-----------------
DNA (71bp)
transferRNA Gly
PLM1_100_b1_sep16_scaffold_3044_10
Sulfitobacter donghicola, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6164..6532)
-----------------
DNA (369bp)
protein (123aa)
Response regulator Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U1X1_MYXSD
Chemotaxis protein CheY {ECO:0000313|EMBL:KEJ88547.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565.;"
response regulator
PLM1_100_b1_sep16_scaffold_3044_11
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6579..7667
-----------------
DNA (1089bp)
protein (363aa)
Putative uncharacterized protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TA41_MICAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL46354.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_3044_12
unknown

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7740..8015
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

Displaying 13 items

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