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PLM1_100_b1_sep16_scaffold_3625

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_3625_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2..271)
-----------------
DNA (270bp)
protein (90aa)
Probable DNA repair protein Slip_1508 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CNI6_SYNLT
Ku protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_3625_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(412..735)
-----------------
DNA (324bp)
protein (108aa)
iap; putative endopeptidase p60 (EC:3.4.-.-)
Uncharacterized protein Tax=Clostridium pasteurianum DSM 525 RepID=L7ER38_CLOPA
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_3625_3
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(776..1525)
-----------------
DNA (750bp)
protein (250aa)
Membrane protein related to metalloendopeptidase Tax=Eggerthella sp. (strain YY7918) RepID=F7UUM5_EEGSY
NlpD; metalloendopeptidase-like membrane protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_3625_4
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1654..2691
-----------------
DNA (1038bp)
protein (346aa)
hypothetical protein Tax=Clostridium tyrobutyricum RepID=UPI00037EACA8
Cell wall-binding protein {ECO:0000313|EMBL:CDL91920.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
yuaE; hypothetical protein
PLM1_100_b1_sep16_scaffold_3625_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2740..3432
-----------------
DNA (693bp)
protein (231aa)
Two component transcriptional regulator, LuxR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8I3_CONWI
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB50947.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_3625_6
unknown

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comp(3429..3734)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_3625_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3835..5055
-----------------
DNA (1221bp)
protein (407aa)
Putative Serine-type D-Ala-D-Ala carboxypeptidase Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z0T3_9ACTN
carboxypeptidase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_3625_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(5035..7056)
-----------------
DNA (2022bp)
protein (674aa)
DNA ligase (EC:6.5.1.2)
DNA ligase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=DNLJ_ROSCS
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_3625_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(7046..7696)
-----------------
DNA (651bp)
protein (217aa)
HAD-superfamily hydrolase subfamily IA, variant 3 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATN9_RUBXD
HAD family hydrolase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_3625_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(7683..7925)
-----------------
DNA (243bp)
protein (81aa)
truA; tRNA pseudouridine synthase A (EC:4.2.1.70)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI000375FB83
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying 10 items

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