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PLM1_100_b1_sep16_scaffold_3972

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_3972_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2..406
-----------------
DNA (405bp)
protein (135aa)
Cyclic nucleotide-binding protein Tax=gamma proteobacterium NOR5-3 RepID=B8KFN2_9GAMM
signal-transduction protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_3972_2
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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454..1521
-----------------
DNA (1068bp)
protein (356aa)
Uncharacterized protein Tax=Bacillus cereus group RepID=A0RLV3_BACAH
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM1_100_b1_sep16_scaffold_3972_3
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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1546..1905
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QAS0_STANL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD44716.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_100_b1_sep16_scaffold_3972_4
unknown

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comp(2287..2409)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_3972_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2411..4303
-----------------
DNA (1893bp)
protein (631aa)
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonyl-tRNA synthetase (Fragment) Tax=uncultured bacterium RepID=F8UVN5_9BACT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_3972_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4521..5027
-----------------
DNA (507bp)
protein (169aa)
translation initiation factor IF-3 Tax=Nocardiopsis alba RepID=UPI000348CD31
translation initiation factor IF-3
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_3972_7
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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5020..5214
-----------------
DNA (195bp)
protein (65aa)
50S ribosomal protein L35 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EG28_9ACTO
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F0400.;"
rpmI; 50S ribosomal protein L35
PLM1_100_b1_sep16_scaffold_3972_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5232..5591
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L20 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=RL20_RUBXD
rplT; 50S ribosomal protein L20
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_3972_9
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5624..6565
-----------------
DNA (942bp)
protein (314aa)
Uncharacterized protein Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQF0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM71802.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_3972_10
unknown

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comp(6466..6834)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_3972_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6914..7204
-----------------
DNA (291bp)
protein (97aa)
tRNA/rRNA methyltransferase (SpoU) Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0H5_CONWI
tRNA/rRNA methyltransferase SpoU
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 11 items

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