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PLM1_100_b1_sep16_scaffold_1055

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1055_1
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..719)
-----------------
DNA (717bp)
protein (239aa)
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] bin=bin1_lowGC species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1)
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
PLM1_100_b1_sep16_scaffold_1055_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(716..1678)
-----------------
DNA (963bp)
protein (321aa)
Electron transfer flavoprotein alpha subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F957_CONWI
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ADB53052.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_1055_3
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1678..2457)
-----------------
DNA (780bp)
protein (260aa)
Electron transfer flavoprotein alpha/beta-subunit Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABT7_THECD
electron transfer flavoprotein subunit alpha/beta
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ACY99110.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_1055_4
R_OD1_48_14, Parcubacteria, Bacteria

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2571..3455
-----------------
DNA (885bp)
protein (295aa)
FG-GAP repeat protein Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3FF0 bin=ACD41 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
PLM1_100_b1_sep16_scaffold_1055_5
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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3465..3854
-----------------
DNA (390bp)
protein (130aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HR20_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL45841.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM1_100_b1_sep16_scaffold_1055_6
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4236..4826)
-----------------
DNA (591bp)
protein (197aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
Thiamine-phosphate synthase Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EBZ8_THECK
thiamine biosynthesis protein ThiS
PLM1_100_b1_sep16_scaffold_1055_7
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4813..5052)
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI0003683921
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67048.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
thiamine biosynthesis protein ThiS
PLM1_100_b1_sep16_scaffold_1055_8
RIFOXYA2_FULL_WOR_1_51_19_curated, WOR-1, Bacteria

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comp(5010..5759)
-----------------
DNA (750bp)
protein (250aa)
Thiazole synthase bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
thiG; thiazole synthase
Tax=RIFOXYA2_FULL_WOR_1_51_19_curated
PLM1_100_b1_sep16_scaffold_1055_9
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(5798..6571)
-----------------
DNA (774bp)
protein (258aa)
Enoyl-CoA hydratase/isomerase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1Z3_SPHTD
Enoyl-CoA hydratase/isomerase
Tax=S_Thermoanaerobacterales_50_218
PLM1_100_b1_sep16_scaffold_1055_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(6568..6873)
-----------------
DNA (306bp)
protein (102aa)
Methylmalonyl-CoA mutase-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATI1_RUBXD
methylmalonyl-CoA mutase-like protein
Methylmalonyl-CoA mutase-like protein {ECO:0000313|EMBL:ABG05297.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_1055_11
Gordonia rubripertincta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6987..7697
-----------------
DNA (711bp)
protein (237aa)
hypothetical protein Tax=Nocardiopsis baichengensis RepID=UPI00034CD8F6
hypothetical protein
Putative hydrolase {ECO:0000313|EMBL:GAB86986.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rubripertincta NBRC 101908.;"
PLM1_100_b1_sep16_scaffold_1055_12
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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7829..8149
-----------------
DNA (321bp)
protein (107aa)
Putative uncharacterized protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM1_100_b1_sep16_scaffold_1055_13
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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8130..9989
-----------------
DNA (1860bp)
protein (620aa)
putative amidotransferase bin=CNBR_ACIDO species=Magnetospirillum gryphiswaldense genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM1_100_b1_sep16_scaffold_1055_14
unknown

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10019..10183
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1055_15
unknown

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10303..10467
-----------------
DNA (165bp)
protein (55aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1055_16
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10507..11373
-----------------
DNA (867bp)
protein (289aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035FB05A
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM1_100_b1_sep16_scaffold_1055_17
unknown

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11370..11915
-----------------
DNA (546bp)
protein (182aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1055_18
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(11823..12743)
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L4R9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH18816.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_1055_19
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(12745..13575)
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L4R7_9ACTO
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
ABC transporter
PLM1_100_b1_sep16_scaffold_1055_20
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(13547..14155)
-----------------
DNA (609bp)
protein (203aa)
Putative ABC transporter ATP-binding Tax=Micromonospora lupini str. Lupac 08 RepID=I0L4R6_9ACTO
Putative ABC transporter ATP-binding {ECO:0000313|EMBL:CCH18813.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
copper transport ATP-binding protein
Displaying 20 items

View Taxonomy