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PLM1_100_b1_sep16_scaffold_1135

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1135_1
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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187..957
-----------------
DNA (771bp)
protein (257aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM1_100_b1_sep16_scaffold_1135_2
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(780..1424)
-----------------
DNA (645bp)
protein (215aa)
Transcriptional regulator, tetR family Tax=Bradyrhizobium sp. YR681 RepID=J3I5G5_9BRAD
Transcriptional regulator {ECO:0000313|EMBL:KJC34116.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
transcriptional regulator
PLM1_100_b1_sep16_scaffold_1135_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

1828..4941
-----------------
DNA (3114bp)
protein (1038aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1135_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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4955..5428
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1135_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

5449..9594
-----------------
DNA (4146bp)
protein (1382aa)
Acriflavin resistance protein bin=GWC2_Chloroflexi_73_18 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
acriflavin resistance protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1135_6
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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9663..10679
-----------------
DNA (1017bp)
protein (339aa)
ABC transporter related protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PLY9_KRIFD
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB32569.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_1135_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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10676..11476
-----------------
DNA (801bp)
protein (267aa)
ABC-2 type transporter Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PLY8_KRIFD
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ADB32568.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_1135_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11476..12012
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PLY7_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB32567.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_1135_9
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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12128..13303
-----------------
DNA (1176bp)
protein (392aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036EBBFA
Putative Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:CCM62143.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_1135_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13254..13985
-----------------
DNA (732bp)
protein (244aa)
ABC transporter related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G762_GEOUR
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ABQ27630.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM1_100_b1_sep16_scaffold_1135_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

14087..15283
-----------------
DNA (1197bp)
protein (399aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037F6950
ABC transporter-like protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM1_100_b1_sep16_scaffold_1135_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(15565..16503)
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036B85BF
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM1_100_b1_sep16_scaffold_1135_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(16890..17246)
-----------------
DNA (357bp)
protein (119aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G758_GEOUR
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM1_100_b1_sep16_scaffold_1135_14
unknown

Not on your lists

comp(17889..18227)
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1135_15
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18453..19556
-----------------
DNA (1104bp)
protein (368aa)
Chitinase {ECO:0000313|EMBL:CEL18336.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CEL18336.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein Tax=Longispora albida RepID=UPI00037B64EA
calcineurin-like phosphoesterase family protein
PLM1_100_b1_sep16_scaffold_1135_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

19721..20035
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ECB0_9CHLR
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1135_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20154..20834
-----------------
DNA (681bp)
protein (227aa)
DNA-binding response regulator TcrA Tax=Patulibacter medicamentivorans RepID=H0E3K5_9ACTN
DNA-binding response regulator TcrA {ECO:0000313|EMBL:EHN11756.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
two component transcriptional regulator
PLM1_100_b1_sep16_scaffold_1135_18
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20837..21199
-----------------
DNA (363bp)
protein (121aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Artificial two-component regulatory system sensor kinase Tax=Patulibacter medicamentivorans RepID=H0E3K2_9ACTN
integral membrane sensor signal transduction histidine kinase
Displaying 18 items

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