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PLM1_100_b1_sep16_scaffold_1525

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1525_1
unknown

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comp(2..340)
-----------------
DNA (339bp)
protein (113aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1525_2
unknown

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comp(340..549)
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1525_3
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(609..2054)
-----------------
DNA (1446bp)
protein (482aa)
Pyridoxal-dependent decarboxylase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BES1_STRRD
pyridoxal-dependent decarboxylase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:ACZ84434.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_1525_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2054..3187)
-----------------
DNA (1134bp)
protein (378aa)
Glycosyl transferase, family 4, conserved region Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F946_CONWI
glycosyl transferase, family 4, conserved region
Glycosyl transferase, family 4, conserved region {ECO:0000313|EMBL:ADB53041.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_1525_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3193..3834)
-----------------
DNA (642bp)
protein (214aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase Tax=Clostridium sartagoforme AAU1 RepID=R9BS72_9CLOT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1525_6
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3831..5120)
-----------------
DNA (1290bp)
protein (430aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2N6N5_9ACTO
PLM1_100_b1_sep16_scaffold_1525_7
unknown

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5186..5473
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1525_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(5401..6003)
-----------------
DNA (603bp)
protein (201aa)
Release factor glutamine methyltransferase Tax=Patulibacter medicamentivorans RepID=H0E4G3_9ACTN
translation factor SUA5
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1525_9
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5996..6826)
-----------------
DNA (831bp)
protein (277aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
Release factor glutamine methyltransferase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVA7_OPITP
protein-(glutamine-N5) methyltransferase
PLM1_100_b1_sep16_scaffold_1525_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6823..7878)
-----------------
DNA (1056bp)
protein (352aa)
Peptide chain release factor 1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F953_CONWI
peptide chain release factor 1
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1525_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(7881..8795)
-----------------
DNA (915bp)
protein (305aa)
Putative uncharacterized protein Tax=Thermincola potens (strain JR) RepID=D5XDJ2_THEPJ
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1525_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(8802..9071)
-----------------
DNA (270bp)
protein (90aa)
50S ribosomal protein L31 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M176_ACIFD
50S ribosomal protein L31
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1525_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(9022..9981)
-----------------
DNA (960bp)
protein (320aa)
L-threonine ammonia-lyase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] bin=bin8_Chloro species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1525_14
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10027..10527
-----------------
DNA (501bp)
protein (167aa)
Cupin 2 conserved barrel domain protein Tax=Mycobacterium rhodesiae JS60 RepID=G4HSE1_MYCRH
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EHB57927.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
cupin 2 domain-containing protein
PLM1_100_b1_sep16_scaffold_1525_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10567..11685)
-----------------
DNA (1119bp)
protein (373aa)
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] bin=bin1_lowGC species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin1_lowGC organism_group=Unknown_CP
electron-transferring-flavoproteindehydrogenase (EC:1.5.5.1)
Tax=CSP1_2_Dadabacteria
Displaying 15 items

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