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PLM1_100_b1_sep16_scaffold_1565

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1565_1
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..353)
-----------------
DNA (351bp)
protein (117aa)
Stage II sporulation protein Tax=Rhodococcus pyridinivorans AK37 RepID=H0JUW9_9NOCA
Stage II sporulation protein {ECO:0000313|EMBL:EHK82065.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
stage II sporulation protein
PLM1_100_b1_sep16_scaffold_1565_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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458..1852
-----------------
DNA (1395bp)
protein (465aa)
Serine/threonine protein kinase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXG8_RUBXD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABG03910.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_1565_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(1857..2906)
-----------------
DNA (1050bp)
protein (350aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
dTDP-glucose 4,6-dehydratase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2D7_SPHTD
dTDP-glucose 4,6-dehydratase
PLM1_100_b1_sep16_scaffold_1565_4
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2985..3662)
-----------------
DNA (678bp)
protein (226aa)
dTDP-4-dehydrorhamnose reductase Tax=Geobacter metallireducens RepID=Q39SS7_GEOMG
rmlD; dTDP-4-dehydrorhamnose reductase
Tax=BJP_08E140C01_Clostridiales_46_19
PLM1_100_b1_sep16_scaffold_1565_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(3746..4207)
-----------------
DNA (462bp)
protein (154aa)
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S223_FERPA
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1565_6
CG_Arma_01, Armatimonadetes, Bacteria

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comp(4204..4947)
-----------------
DNA (744bp)
protein (248aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase bin=GWC2_Syntrophobacterales_56_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Arma_01
PLM1_100_b1_sep16_scaffold_1565_7

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comp(4961..5455)
-----------------
DNA (495bp)
protein (165aa)
Appr-1-p processing domain protein Tax=Aminomonas paucivorans DSM 12260 RepID=E3D0S4_9BACT
Marine sediment metagenome DNA, contig: S06H3_C04706 {ECO:0000313|EMBL:GAI06188.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Appr-1-p processing protein
PLM1_100_b1_sep16_scaffold_1565_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(5466..7682)
-----------------
DNA (2217bp)
protein (739aa)
MMPL domain protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SCL0_NOCSJ
MMPL domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1565_9
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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7765..8202
-----------------
DNA (438bp)
protein (146aa)
Heat shock protein Hsp20 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NFQ0_DESAR
heat shock protein Hsp20
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_1565_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8199..10538
-----------------
DNA (2340bp)
protein (780aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Lon protease Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF86_CONWI
PLM1_100_b1_sep16_scaffold_1565_11
unknown

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10578..10997
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1565_12
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11011..11517)
-----------------
DNA (507bp)
protein (169aa)
Metalloendopeptidase-like membrane protein Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W957_DESOD
Peptidase, M23/M37 family {ECO:0000313|EMBL:KJR44284.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
metalloendopeptidase-like membrane protein
Displaying 12 items

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