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PLM1_100_b1_sep16_scaffold_1607

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1607_1
unknown

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1..93
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1607_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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90..1271
-----------------
DNA (1182bp)
protein (394aa)
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase (B12-independent) {ECO:0000313|EMBL:ABG03808.1}; EC=2.1.1.14 {ECO:0000313|EMBL:ABG03808.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Methionine synthase (B12-independent) Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXS0_RUBXD
PLM1_100_b1_sep16_scaffold_1607_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1288..2412
-----------------
DNA (1125bp)
protein (375aa)
glutamate--cysteine ligase Tax=Patulibacter americanus RepID=UPI0003B3A240
carboxylate-amine ligase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1607_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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2643..4544
-----------------
DNA (1902bp)
protein (634aa)
Cell envelope-related transcriptional attenuator Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F933_CONWI
cell envelope-related transcriptional attenuator
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1607_5
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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4555..5898
-----------------
DNA (1344bp)
protein (448aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
UDP-glucose dehydrogenase Tax=Patulibacter medicamentivorans RepID=H0E4I3_9ACTN
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_1607_6
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

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6069..6767
-----------------
DNA (699bp)
protein (233aa)
nucleotidyl transferase bin=bin9_gal15 species=Streptomyces sp. AA1529 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
guanyltransferase
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
PLM1_100_b1_sep16_scaffold_1607_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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6920..7318
-----------------
DNA (399bp)
protein (133aa)
cupin domain-containing protein bin=CNBR_ACIDO species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cupin
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1607_8
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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7528..8793
-----------------
DNA (1266bp)
protein (422aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Adenosylhomocysteinase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5C9_ANATU
PLM1_100_b1_sep16_scaffold_1607_9
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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8837..9859
-----------------
DNA (1023bp)
protein (341aa)
nucleotidyl transferase Tax=Patulibacter americanus RepID=UPI0003B67345
nucleotidyl transferase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_1607_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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10102..10773
-----------------
DNA (672bp)
protein (224aa)
hypothetical protein Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0003099468
competence protein F
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_1607_11
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

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10828..11352
-----------------
DNA (525bp)
protein (175aa)
Sigma 54 modulation protein / SSU ribosomal protein S30P Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVJ5_RUBXD
sigma 54 modulation protein/30S ribosomal protein S30P
Tax=RBG_16_Actinobacteria_64_13_curated
Displaying 11 items

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