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PLM1_100_b1_sep16_scaffold_1628

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1628_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2..121)
-----------------
DNA (120bp)
protein (40aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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221..1066
-----------------
DNA (846bp)
protein (282aa)
Cyclase family protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SC37_GEOOG
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:ADB74205.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_100_b1_sep16_scaffold_1628_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1087..1428)
-----------------
DNA (342bp)
protein (114aa)
Myo-inositol-1-phosphate synthase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4I3_SPHTD
Myo-inositol-1-phosphate synthase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1392..2525)
-----------------
DNA (1134bp)
protein (378aa)
Myo-inositol-1-phosphate synthase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4I3_SPHTD
Myo-inositol-1-phosphate synthase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2577..3203)
-----------------
DNA (627bp)
protein (209aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Tax=Patulibacter medicamentivorans RepID=H0EBU6_9ACTN
CDP-alcohol phosphatidyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3219..3989)
-----------------
DNA (771bp)
protein (257aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAF6_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4034..5038)
-----------------
DNA (1005bp)
protein (335aa)
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein bin=bin8_Chloro species=Methyloversatilis sp. NVD genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
moaA; molybdenum cofactor biosynthesis protein A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM1_100_b1_sep16_scaffold_1628_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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5057..5974
-----------------
DNA (918bp)
protein (306aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003632E32
DMT family permease
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1628_9
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5956..6258)
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YB52_THEBD
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KJK43106.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
PLM1_100_b1_sep16_scaffold_1628_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6369..8279
-----------------
DNA (1911bp)
protein (637aa)
Chaperone protein DnaK Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAG2_CONWI
chaperone protein DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_1628_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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8279..8830
-----------------
DNA (552bp)
protein (184aa)
Protein GrpE Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=GRPE_RUBXD
GrpE protein HSP-70 cofactor
Protein GrpE {ECO:0000255|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000255|HAMAP-Rule:MF_01151}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_1628_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

8827..9900
-----------------
DNA (1074bp)
protein (358aa)
Chaperone protein DnaJ Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXX4_RUBXD
chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_1628_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9900..10292
-----------------
DNA (393bp)
protein (131aa)
Transcriptional regulator, MerR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXX3_RUBXD
MerR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10268..12718
-----------------
DNA (2451bp)
protein (817aa)
ATPase AAA-2 domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BQ1_SOLUE
ATPase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_15
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13496..13894)
-----------------
DNA (399bp)
protein (133aa)
Glyoxalase family protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JK17_9BACT
Glyoxalase family protein {ECO:0000313|EMBL:EDY82674.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_100_b1_sep16_scaffold_1628_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13920..14537
-----------------
DNA (618bp)
protein (206aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_17
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14525..14698)
-----------------
DNA (174bp)
protein (58aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00036FFF07
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1628_18

Not on your lists

14780..15067
-----------------
DNA (288bp)
protein (96aa)
Hypothetical conserved protein Tax=uncultured prokaryote RepID=H5S8V3_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL52589.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
GYD domain superfamily
PLM1_100_b1_sep16_scaffold_1628_19
unknown

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15103..15291
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1628_20
unknown

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comp(15312..15851)
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B560F4
PLM1_100_b1_sep16_scaffold_1628_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15856..16224)
-----------------
DNA (369bp)
protein (123aa)
Pseudouridine-5'-phosphate glycosidase bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes
Pseudouridine-5'-phosphate glycosidase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1628_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16654..17460)
-----------------
DNA (807bp)
protein (269aa)
ribokinase Tax=Frankia sp. Iso899 RepID=UPI0003B501CA
ribokinase-like domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 22 items

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