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PLM1_100_b1_sep16_scaffold_1651

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1651_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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2..163
-----------------
DNA (162bp)
protein (54aa)
formate dehydrogenase subunit alpha (EC:1.7.99.4)
Putative formate dehydrogenase alpha subunit Tax=Plesiocystis pacifica SIR-1 RepID=A6GJI2_9DELT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1651_2
unknown

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363..959
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1651_3
unknown

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1035..1532
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1651_4
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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1617..2993
-----------------
DNA (1377bp)
protein (459aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I887_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM01475.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM1_100_b1_sep16_scaffold_1651_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3103..3846
-----------------
DNA (744bp)
protein (248aa)
Putative uncharacterized protein Tax=Chloroflexus RepID=A9WIJ5_CHLAA
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1651_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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3966..5540
-----------------
DNA (1575bp)
protein (525aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B68C41
putative GAF sensor protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1651_7
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5631..7019
-----------------
DNA (1389bp)
protein (463aa)
glutamine synthetase I (EC:6.3.1.2)
Glutamine synthetase, type III {ECO:0000313|EMBL:AEA27059.1}; EC=6.3.1.2 {ECO:0000313|EMBL:AEA27059.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003679F21
PLM1_100_b1_sep16_scaffold_1651_8
unknown

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7108..7626
-----------------
DNA (519bp)
protein (173aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1651_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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7715..8290
-----------------
DNA (576bp)
protein (192aa)
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
RNA polymerase sigma24 factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1651_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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8315..8563
-----------------
DNA (249bp)
protein (83aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1651_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(8560..9159)
-----------------
DNA (600bp)
protein (200aa)
fcha; methenyltetrahydrofolate cyclohydrolase Fcha (EC:3.5.4.9) bin=RBG_19FT_COMBO_GAL15_69_19 species=Bacteroides xylanisolvens genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
formimidoyltetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1651_12
unknown

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9217..9471
-----------------
DNA (255bp)
protein (85aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1651_13
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9490..10263
-----------------
DNA (774bp)
protein (258aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Tax=Microcoleus vaginatus FGP-2 RepID=F5UL79_9CYAN
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase {ECO:0000313|EMBL:EGK85575.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
uroporphyrin-III C-methyltransferase
PLM1_100_b1_sep16_scaffold_1651_14
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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comp(10226..13402)
-----------------
DNA (3177bp)
protein (1059aa)
cyaI2; adenylate/guanylate cyclase (EC:4.6.1.1)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM1_100_b1_sep16_scaffold_1651_15
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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13512..14351
-----------------
DNA (840bp)
protein (280aa)
Glutamate synthase family protein Tax=Beggiatoa alba B18LD RepID=I3CBV7_9GAMM
Glutamine amidotransferase {ECO:0000313|EMBL:ETW93072.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
glutamine amidotransferase
Displaying 15 items

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