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PLM1_100_b1_sep16_scaffold_1849

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1849_1
unknown

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44..220
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1849_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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513..2411
-----------------
DNA (1899bp)
protein (633aa)
UspA domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBR2_CONWI
UspA domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1849_3
unknown

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2408..2578
-----------------
DNA (171bp)
protein (57aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1849_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2578..3129
-----------------
DNA (552bp)
protein (184aa)
Amino acid/polyamine/organocation transporter, APC superfamily Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I755_METCZ
amino acid/polyamine/organocation transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1849_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3126..3539
-----------------
DNA (414bp)
protein (138aa)
TrkA-N domain protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFL8_THET1
TrkA-N domain-containing protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1849_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3539..4207
-----------------
DNA (669bp)
protein (223aa)
portal protein Tax=Patulibacter americanus RepID=UPI0003B53B1D
TrkA-N domain-containing protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1849_7
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4372..4872)
-----------------
DNA (501bp)
protein (167aa)
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:ABG05438.1}; EC=4.3.1.4 {ECO:0000313|EMBL:ABG05438.1};; Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:ABG04529.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Formimidoyltetrahydrofolate cyclodeaminase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT40_RUBXD
formiminotransferase-cyclodeaminase
PLM1_100_b1_sep16_scaffold_1849_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4847..6514)
-----------------
DNA (1668bp)
protein (556aa)
Formate--tetrahydrofolate ligase Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EJ64_9FIRM
Formate--tetrahydrofolate ligase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1849_9
RLO_PLX_64_10, Bacteria

Not on your lists

comp(6681..7895)
-----------------
DNA (1215bp)
protein (405aa)
sarcosine oxidase subunit beta Tax=Yaniella halotolerans RepID=UPI0003B5561C
FAD dependent oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_100_b1_sep16_scaffold_1849_10
unknown

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comp(7892..8452)
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1849_11
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8449..11052)
-----------------
DNA (2604bp)
protein (868aa)
aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000313|EMBL:CCG08930.1}; EC=2.1.2.10 {ECO:0000313|EMBL:CCG08930.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
Aminomethyltransferase Tax=Rhodospirillum photometricum DSM 122 RepID=H6SLR5_RHOPH
PLM1_100_b1_sep16_scaffold_1849_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11049..11321)
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003816D40
sarcosine oxidase delta subunit
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1849_13
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11332..12669)
-----------------
DNA (1338bp)
protein (446aa)
glutamate synthase Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=UPI000368A3A9
glutamate synthase
Glutamate synthase {ECO:0000313|EMBL:AHC27727.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
PLM1_100_b1_sep16_scaffold_1849_14
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12674..13396)
-----------------
DNA (723bp)
protein (241aa)
protein glxC Tax=Streptomyces prunicolor RepID=UPI00036F3283
mgsB; N-methyl glutamate synthase subunit B
N-methyl glutamate synthase subunit B {ECO:0000313|EMBL:CCB67573.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM1_100_b1_sep16_scaffold_1849_15
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13393..13593)
-----------------
DNA (201bp)
protein (67aa)
Amidophosphoribosyltransferase {ECO:0000313|EMBL:EXJ11708.1}; EC=2.4.2.14 {ECO:0000313|EMBL:EXJ11708.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
hypothetical protein Tax=Pantoea sp. A4 RepID=UPI00036FFEAC
putative glutamine amidotransferase
Displaying 15 items

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