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PLM1_100_b1_sep16_scaffold_1865

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1865_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(1..1029)
-----------------
DNA (1029bp)
protein (343aa)
Sulfate permease-like transporter, MFS superfamily Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NK89_KYTSD
sulfate permease-like transporter, MFS superfamily
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1865_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1082..2461
-----------------
DNA (1380bp)
protein (460aa)
Beta-lactamase-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUZ4_RUBXD
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:ABG04784.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_1865_trna_1
unknown

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2497..2570
-----------------
DNA (74bp)
transferRNA Met
PLM1_100_b1_sep16_scaffold_1865_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2770..3099
-----------------
DNA (330bp)
protein (110aa)
Protein translocase subunit SecE Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U3J0_ETHHY
Preprotein translocase subunit SecE
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_1865_4

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3099..3629
-----------------
DNA (531bp)
protein (177aa)
Transcription termination/antitermination protein NusG Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FES7_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKM05546.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NusG antitermination factor
PLM1_100_b1_sep16_scaffold_1865_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3629..4054
-----------------
DNA (426bp)
protein (142aa)
50S ribosomal protein L11 Tax=Salimicrobium sp. MJ3 RepID=K2G7L8_9BACI
50S ribosomal protein L11
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1865_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4221..4952
-----------------
DNA (732bp)
protein (244aa)
50S ribosomal protein L1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FES9_CONWI
50S ribosomal protein L1
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1865_7
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5089..5634
-----------------
DNA (546bp)
protein (182aa)
50S ribosomal protein L10 Tax=Serinicoccus profundi RepID=UPI000255E67F
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD142.;"
PLM1_100_b1_sep16_scaffold_1865_8
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5624..6016
-----------------
DNA (393bp)
protein (131aa)
50S ribosomal protein L7 Tax=Amorphus coralli RepID=UPI00036AF472
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
rplL; 50S ribosomal protein L7/L12
PLM1_100_b1_sep16_scaffold_1865_9
unknown

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6196..6867
-----------------
DNA (672bp)
protein (224aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1865_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7084..10482
-----------------
DNA (3399bp)
protein (1133aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FET2_CONWI
Displaying 11 items

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