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PLM1_100_b1_sep16_scaffold_1986

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1986_1
unknown

Not on your lists

2..745
-----------------
DNA (744bp)
protein (248aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1986_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

803..1870
-----------------
DNA (1068bp)
protein (356aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6N8_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1986_3
unknown

Not on your lists

comp(2050..2181)
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1986_4
unknown

Not on your lists

comp(2368..2964)
-----------------
DNA (597bp)
protein (199aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1986_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3045..3824
-----------------
DNA (780bp)
protein (260aa)
Protein FdhD homolog Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FFJ1_CONWI
formate dehydrogenase family accessory protein FdhD
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_1986_6
unknown

Not on your lists

3947..4339
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1986_7
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4336..5616)
-----------------
DNA (1281bp)
protein (427aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000255|HAMAP-Rule:MF_00011}; Short=AMPSase {ECO:0000255|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000255|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000255|HAMAP-Rule:MF_00011};; IMP--aspartate ligase {ECO:0000255|HAMAP-Rule:MF_00011}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
adenylosuccinate synthetase Tax=actinobacterium SCGC AAA027-M14 RepID=UPI000366C857
PLM1_100_b1_sep16_scaffold_1986_8
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5640..7031)
-----------------
DNA (1392bp)
protein (464aa)
Replicative DNA helicase Tax=Thermincola potens (strain JR) RepID=D5XDQ5_THEPJ
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:ADG83801.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM1_100_b1_sep16_scaffold_1986_9
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(7204..7737)
-----------------
DNA (534bp)
protein (178aa)
50S ribosomal protein L9 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=RL9_RUBXD
50S ribosomal protein L9
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1986_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(7747..8001)
-----------------
DNA (255bp)
protein (85aa)
30S ribosomal protein S18 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3T7_CONWI
30S ribosomal protein S18
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1986_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8004..8456)
-----------------
DNA (453bp)
protein (151aa)
Single-stranded DNA-binding protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3T6_CONWI
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_1986_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(8491..8823)
-----------------
DNA (333bp)
protein (111aa)
30S ribosomal protein S6 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXR2_RUBXD
30S ribosomal protein S6
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1986_13
unknown

Not on your lists

8972..9307
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1986_14
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9304..10077)
-----------------
DNA (774bp)
protein (258aa)
N-acetylmuramoyl-L-alanine amidase Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EB94_9FIRM
AmiC; N-acetylmuramoyl-L-alanine amidase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM1_100_b1_sep16_scaffold_1986_15
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

10079..10858
-----------------
DNA (780bp)
protein (260aa)
iron permease FTR1; K07243 high-affinity iron transporter bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
iron permease FTR1
Tax=RBG_16_Chloroflexi_57_8_curated
PLM1_100_b1_sep16_scaffold_1986_16
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(10867..11961)
-----------------
DNA (1095bp)
protein (365aa)
Stk1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1Q1_THERP
hypothetical protein
Stk1 {ECO:0000313|EMBL:ACM05091.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM1_100_b1_sep16_scaffold_1986_17
unknown

Not on your lists

comp(11958..12368)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1986_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12541..12810
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein Tax=Variovorax paradoxus B4 RepID=T1X889_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU48544.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
PLM1_100_b1_sep16_scaffold_1986_19
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

12835..13449
-----------------
DNA (615bp)
protein (205aa)
Bifunctional deaminase-reductase domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C974_SPHTD
bifunctional deaminase-reductase domain-containing protein
Tax=RBG_16_Chloroflexi_56_8_curated
PLM1_100_b1_sep16_scaffold_1986_20
unknown

Not on your lists

comp(13442..13852)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1986_21
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13934..14341
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein Tax=Ruegeria conchae RepID=UPI000237A358
Uncharacterized protein {ECO:0000313|EMBL:KIC20356.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_1986_22
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14615..15043)
-----------------
DNA (429bp)
protein (143aa)
Uncharacterized protein Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RI96_MYCRN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV73433.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
Displaying 22 items

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