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PLM1_100_b1_sep16_scaffold_872_12

Organism: PLM1_100_b1_sep16_Actinobacteria_69_15

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(6951..7613)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 215.0
  • Bit_score: 255
  • Evalue 4.80e-65
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 215.0
  • Bit_score: 255
  • Evalue 1.40e-65
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 215.0
  • Bit_score: 349
  • Evalue 2.00e-93

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGCCCCGCCGTCAGCTCGCAACGGTCGCCCCGCAAGAGAAAGCCCAACGAGAGTCCCAGGACCTGCGGCTCGTCCTCCGCGCCCGCAACGGCGACGACGCGGCGATGGACACGCTGCTGCGGCGCTACACGGGCTTCGTCCGCCTCAAGGCGAGCTCGTACTTCCTGGCGGGCGGCGAATCGGACGACCTCATCCAGGAGGGCCTCGTCGGTCTCTACAAGGCCGTGCGCGACTTCCGGTCCGACAAGGACACGACCTTCCGGAGCTTCGCCGAGCTCTGCATCACGCGCCAGATCATCACCGCGATCAAGACGGCGACCCGGTACAAGCACTCGCCGCTCAACACCTACGTTTCGTTCAGCCACACGCCCGCGGGCCAGGAGGAGGGGGAGTGCACGCTCGGCGACGCCTTGCCCGGCCCTGGGATCGACGATCCGGCCATCTGCGTCATCTCGACCGAGGAGCTTCAGAGCCTCGTCTTCTGTCTCGGCACCGGCCTCTCGTCGCTCGAGTCGGACGCGCTCCGGCTCTACATCGAGGGAAACTCCTACGAGGAGATGGCCGAGCTGCTCGGCTGCGACACGAAGACGATCGACAACGCGCTCCAGCGGGTGAAGCGCAAGATCCTCCTCCACCAGCAGGGCCGCCAGGTTCTCGATTGA
PROTEIN sequence
Length: 221
MPRRQLATVAPQEKAQRESQDLRLVLRARNGDDAAMDTLLRRYTGFVRLKASSYFLAGGESDDLIQEGLVGLYKAVRDFRSDKDTTFRSFAELCITRQIITAIKTATRYKHSPLNTYVSFSHTPAGQEEGECTLGDALPGPGIDDPAICVISTEELQSLVFCLGTGLSSLESDALRLYIEGNSYEEMAELLGCDTKTIDNALQRVKRKILLHQQGRQVLD*