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PLM1_100_b1_sep16_scaffold_872

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_872_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..492
-----------------
DNA (492bp)
protein (164aa)
TldD/PmbA family protein bin=GWC1_CPR2_39_9 species=unknown genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
C69 family peptidase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM1_100_b1_sep16_scaffold_872_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

489..1874
-----------------
DNA (1386bp)
protein (462aa)
TldD protein bin=bin8_Chloro species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin8_Chloro organism_group=Chloroflexi
Protein pmbA
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_872_3
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1871..2947
-----------------
DNA (1077bp)
protein (359aa)
glycoside hydrolase family protein bin=bin8_Chloro species=Elioraea tepidiphila genus=Elioraea taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM1_100_b1_sep16_scaffold_872_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

2938..3195
-----------------
DNA (258bp)
protein (86aa)
Sulfur carrier protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L1F8_9ACTO
MoaD family protein {ECO:0000313|EMBL:CDM66173.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
MoaD family protein
PLM1_100_b1_sep16_scaffold_872_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3251..3472)
-----------------
DNA (222bp)
protein (74aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3517..3732
-----------------
DNA (216bp)
protein (72aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3707..4615)
-----------------
DNA (909bp)
protein (303aa)
Cation diffusion facilitator family transporter Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F034_CONWI
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ADB50010.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_872_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4612..5634)
-----------------
DNA (1023bp)
protein (341aa)
Glycosyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZZ5_9FIRM
group 1 glycosyl transferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_9
unknown

Not on your lists

5705..5950
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_872_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5959..6222)
-----------------
DNA (264bp)
protein (88aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_11
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6257..6847)
-----------------
DNA (591bp)
protein (197aa)
Dioxygenase Tax=Burkholderia terrae BS001 RepID=I5CEN7_9BURK
Dioxygenase {ECO:0000313|EMBL:EIM94355.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
dioxygenase
PLM1_100_b1_sep16_scaffold_872_trna_1
unknown

Not on your lists

comp(6855..6927)
-----------------
DNA (73bp)
transferRNA Thr
PLM1_100_b1_sep16_scaffold_872_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6951..7613)
-----------------
DNA (663bp)
protein (221aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7715..8143)
-----------------
DNA (429bp)
protein (143aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8199..8912)
-----------------
DNA (714bp)
protein (238aa)
RNA methyltransferase, TrmH family, group 3 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F143_CONWI
TrmH family RNA methyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8909..10195)
-----------------
DNA (1287bp)
protein (429aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase Tax=Patulibacter americanus RepID=UPI0003B3B7DC
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

10250..10954
-----------------
DNA (705bp)
protein (235aa)
Putative lipoprotein bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_872_17
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10944..12179)
-----------------
DNA (1236bp)
protein (412aa)
Isocitrate lyase {ECO:0000313|EMBL:EKP95339.1}; EC=4.1.3.1 {ECO:0000313|EMBL:EKP95339.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
isocitrate lyase (EC:4.1.3.1)
Isocitrate lyase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q2R7_9FIRM
PLM1_100_b1_sep16_scaffold_872_18
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12190..13743)
-----------------
DNA (1554bp)
protein (518aa)
malate synthase A (EC:2.3.3.9)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
Malate synthase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SML9_THEM7
PLM1_100_b1_sep16_scaffold_872_19
unknown

Not on your lists

comp(13746..13880)
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_872_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13938..14882
-----------------
DNA (945bp)
protein (315aa)
Transcriptional regulator, LysR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUB8_RUBXD
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM1_100_b1_sep16_scaffold_872_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14899..15897)
-----------------
DNA (999bp)
protein (333aa)
Glutamate--tRNA ligase Tax=Akkermansia muciniphila CAG:154 RepID=R6K1M4_9BACT
glutamyl-tRNA synthetase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_872_22
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(15894..16376)
-----------------
DNA (483bp)
protein (161aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7G2_SPHTD
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM1_100_b1_sep16_scaffold_872_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16409..17128
-----------------
DNA (720bp)
protein (240aa)
HhH-GPD family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAY2_CONWI
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:ADB51295.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 24 items

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