ggKbase home page

PLM1_100_b1_sep16_scaffold_1194_4

Organism: PLM1_100_b1_sep16_Actinobacteria_69_15

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(4665..5720)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase domain protein bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 335.0
  • Bit_score: 326
  • Evalue 2.10e-86
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 30.8
  • Coverage: 331.0
  • Bit_score: 148
  • Evalue 2.20e-33
Tax=GWC2_RIF_CHLX_73_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 335.0
  • Bit_score: 326
  • Evalue 2.90e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1056
TTGGACGGTAAGGCCGCTCTTCGGCGTGCCACCCTCGCCGCAGTGCGCGGCAACGCGTTCACATGGTTGGTGGCCGCGCTCGAGCAGGTCGGCCGCCCGCGGCCCGGCGTTCTCCCCGTGCTGACGTACCACCGTGTCGACGTCCTGGGACTTTCCCCGCTGCTCTATCCGGGTCTGATCAGCGCGGAACCTGCCGCCTTCGATGAGCAGATGCGCTTCCTCGCGACTCACCGGCGCCCCCTTTCGCTGGCGGAGCTGCTGGCCGTCCGCCGGGGAGAGGCCGATTTACCGCTGCGCTCGGTCATGGTCACTTTTGACGACGCCTACCGCGATTTCGCCGCTGTCGCGTGGCCGATCCTCAAGCGCCACGGGATCCCGGTCACGCTCTTCGTACCCACCGCGTATCCCGGCGACCGAGACATGGTGTTCTGGTGGGACCGGTTGTACGCGGCGGTCAGCACAACGAGCCGGACAGCGCCGCTCGCCTCTCTCGCAGGGCCGATGGTGCTCGCGACGGAGGCGCAACGGTTGCAGACATTCCGGCGGCTCCGAAGCCACCTTAAGTCACTCCCGCACGAGCAGGCGATGAAGGCTGTCGACGAGCTCTGCGAGGAGCTCGGGGCGCCTCCTCCGGTTTCCGCCGTCCTCAGCTGGCCTGAGCTTCGCCAGCTTCACTCGGAGGGAGTCGCGCTCGCGCCCCATTCGAGGACCCACCCGTTGCTCAACCGTCTCCCCGCCGAGGCGTTGTACAACGAGATCGTCGGGTCCCTCGAGGATCTCGAGCGCGAAATGGGCGAAGCACCCCGCGTCTTCGCCTTTCCGGGAGGGGGCGTCAACCACGAGGTCGCCCAGACGATCCAAGAGGCCCGATTCGAGCTTGCTTTTCTGACAGAGCGGGGCACGAACGACCTGCGGAGGGGCGACTGGCTGCGCCTGCGCAGGATCAACGTCGGGCGCGCATCCGGACTTCCGCTCGTCCGCGCTCAGCTTCTGCCCTGGTGGACAAGAGTCGAGACCGCACACGAAGGAGGTTCACGATCTGCTCAACGAGCGTGA
PROTEIN sequence
Length: 352
LDGKAALRRATLAAVRGNAFTWLVAALEQVGRPRPGVLPVLTYHRVDVLGLSPLLYPGLISAEPAAFDEQMRFLATHRRPLSLAELLAVRRGEADLPLRSVMVTFDDAYRDFAAVAWPILKRHGIPVTLFVPTAYPGDRDMVFWWDRLYAAVSTTSRTAPLASLAGPMVLATEAQRLQTFRRLRSHLKSLPHEQAMKAVDELCEELGAPPPVSAVLSWPELRQLHSEGVALAPHSRTHPLLNRLPAEALYNEIVGSLEDLEREMGEAPRVFAFPGGGVNHEVAQTIQEARFELAFLTERGTNDLRRGDWLRLRRINVGRASGLPLVRAQLLPWWTRVETAHEGGSRSAQRA*