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PLM1_100_b1_sep16_scaffold_1194

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1194_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

3..1433
-----------------
DNA (1431bp)
protein (477aa)
polysaccharide biosynthesis protein bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
membrane protein involved in the export of O-antigen and teichoic acid
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_2
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(1441..2721)
-----------------
DNA (1281bp)
protein (427aa)
Capsular exopolysaccharide family bin=GWC2_Chloroflexi_73_18 species=unknown genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
protein tyrosine kinase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_3
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2825..4546)
-----------------
DNA (1722bp)
protein (574aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Arthrobacter sp. SJCon genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4665..5720)
-----------------
DNA (1056bp)
protein (352aa)
Polysaccharide deacetylase domain protein bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
polysaccharide deacetylase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5710..6924)
-----------------
DNA (1215bp)
protein (405aa)
Hydrolase, exosortase system type 1 associated bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(6921..7649)
-----------------
DNA (729bp)
protein (243aa)
Thymidylate kinase bin=GWC2_Chloroflexi_73_18 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
thymidylate kinase-like protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7646..8665)
-----------------
DNA (1020bp)
protein (340aa)
Aminoglycoside phosphotransferase bin=GWC2_Chloroflexi_73_18 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
aminoglycoside phosphotransferase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_8
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8662..9273)
-----------------
DNA (612bp)
protein (204aa)
Aminoglycoside phosphotransferase bin=GWC2_Chloroflexi_73_18 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_9
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9280..10401)
-----------------
DNA (1122bp)
protein (374aa)
HPr kinase bin=GWC2_Chloroflexi_73_18 species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
HPr kinase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(10405..11214)
-----------------
DNA (810bp)
protein (270aa)
Uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_11
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11217..11834)
-----------------
DNA (618bp)
protein (206aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1194_12
unknown

Not on your lists

comp(11856..12488)
-----------------
DNA (633bp)
protein (211aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1194_13
unknown

Not on your lists

comp(12571..13044)
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1194_14
unknown

Not on your lists

14005..14679
-----------------
DNA (675bp)
protein (225aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1194_15
unknown

Not on your lists

comp(15480..15626)
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1194_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15693..16454)
-----------------
DNA (762bp)
protein (254aa)
hypothetical protein Tax=Mycobacterium avium RepID=UPI0002FAF8EE
peroxidase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1194_17
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

16471..17151
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein Tax=Rhodococcus sp. (strain RHA1) RepID=Q0S5R3_RHOSR
hypothetical protein
Tax=RBG_16_Armatimonadetes_67_12_curated
Displaying 17 items

View Taxonomy