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PLM1_100_b1_sep16_scaffold_2004_1

Organism: PLM1_100_b1_sep16_Actinobacteria_69_15

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(3..1406)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box Tax=Oscillatoria acuminata PCC 6304 RepID=K9TMW8_9CYAN similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 248.0
  • Bit_score: 172
  • Evalue 8.70e-40
GGDEF: diguanylate cyclase (GGDEF) domain similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 257.0
  • Bit_score: 183
  • Evalue 1.40e-43
GGDEF: diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:AHY47118.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.9
  • Coverage: 257.0
  • Bit_score: 183
  • Evalue 6.90e-43

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Taxonomy

Rubrobacter radiotolerans → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
GTGACTCCGATTCCGGTCGCCGAGAGGCCGCCGCGGCTCGTCCTGCGCTTCGCGTTCTACAGCGCGCTCGCACTCCTGCTCGCGGGCGCCGCCATCTTCTGGTTCGTGCAGGCGAAGGCCGTGGAGCAGGCTGAACGTGCCCTCTTGCAGCACGCAACGGTCGTCGCCAGGGGCCTCTCCGACGAGCTGAAGGCCGCCGACCTTGCAGCGCCGGTTGACGGCCGGCGCCGGCGGGAGCTCGACGATGCGATGCGCGACGAGATTCGGGACGGGATCGTCCGGGTCAAGCTGTGGAGCTCGGACGGGACCCTCACGTACTCGAACGATTCGTCGCAGATCGGCATGCTCACGACCGAGCCCAGCGATCTCGCTCGCGTCCTGGCGGGCGAGCAGCTCCTCGAGACCACCGATCTTCAGGGCGAGAGCCCGGGCGACCGGGAGCAGAAGGTCCTCGAAGCCTTCGTCCCGATTCGCCTAAAGGGATCGAAAGAGCCGGTAGGGGCGCTCGAGCTCCACGAGGACTACGGCGTGCTCGCGGCGAGCGTACGCGACACGGTGATTCCGGTGGCGGCCGTGCTCGTCATCGCGCTCGTGCTCCTCTACGGCGCCCTCTTTCCGATCCTGCGCCAGGTCACGAGCGCGCTCGCGACCCGCAATCGCCGGTTGACCGAGCAGAGCGACGCACTGCAGCAGACGCTGGCCGCACGGGAGCAGACGGAGCGCCGGCTGCAGGAGGCCGAGGCGAGCTACCGCGCGCTCGTCGAGCAGCTACCCCTCGTCACCTACATCAACGAGCTGAACGAGTCGAGCTCGACTATCTACATGAGCCCGCAGATCGACTCGGTCCTCGGCTACTCGCCCGACGAGTGGCTCGCAGATCCCGATCTCTTCCCCAAGCTGCTCCATCCGGACGACCGTGAGCGCGTGCTCGAGGAGCACCGCCGCTCCTTCGCGGACGGCACGTCCTTCTCGTCCGAGTACAGGCTCCTGGCCAAGGACGGGCGCGTGGTCTGGTTTCACGACGAGGTCATGATCGTGCGCGACGCCGAGGGGCAGCCGCAGCACGCCCAGGGGTTCCTGCTCGACGTGACCGAGCGCAGGGAAGCCGAAGAGGCGCTGCTCGGGAGCGAGGAGCGGTTCCGCACCCTGGTCTCGAACGTCCCCGGCGTGATCTTCCGCTGCGCGAACGACGAGAACTGGACGGTCGAGTACATCTCGGACGCGATCGAGGAGCTGACCGGGTACCCGGCCTCCGATTTCATCGGGAACCGTGTACGCCCGCTGGTAAGCGTCATCCATCCCGAAGATCAGGCGCGCGTGGCCGAGACGGTCGATGCCGCCGCCGAGGAGGACAGGCCCTATGCGGTGGAGTACCGGGTCGTCACGCGCGACGGCTCGACGCGC
PROTEIN sequence
Length: 468
VTPIPVAERPPRLVLRFAFYSALALLLAGAAIFWFVQAKAVEQAERALLQHATVVARGLSDELKAADLAAPVDGRRRRELDDAMRDEIRDGIVRVKLWSSDGTLTYSNDSSQIGMLTTEPSDLARVLAGEQLLETTDLQGESPGDREQKVLEAFVPIRLKGSKEPVGALELHEDYGVLAASVRDTVIPVAAVLVIALVLLYGALFPILRQVTSALATRNRRLTEQSDALQQTLAAREQTERRLQEAEASYRALVEQLPLVTYINELNESSSTIYMSPQIDSVLGYSPDEWLADPDLFPKLLHPDDRERVLEEHRRSFADGTSFSSEYRLLAKDGRVVWFHDEVMIVRDAEGQPQHAQGFLLDVTERREAEEALLGSEERFRTLVSNVPGVIFRCANDENWTVEYISDAIEELTGYPASDFIGNRVRPLVSVIHPEDQARVAETVDAAAEEDRPYAVEYRVVTRDGSTR