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PLM1_100_b1_sep16_scaffold_23

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Displaying items 1-30 of 102 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_23_1
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..940)
DNA (939bp) protein (313aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000366F96C
Uncharacterized protein {ECO:0000313|EMBL:KDN22088.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
chemotaxis protein CheY
PLM1_100_b1_sep16_scaffold_23_2
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(944..1939)
DNA (996bp) protein (332aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000366F96C
Transcriptional regulator NarL {ECO:0000313|EMBL:CEA09493.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
TrmB family transcriptional regulator
PLM1_100_b1_sep16_scaffold_23_3
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2295..3110
DNA (816bp) protein (272aa)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YFS3_9ACTO
short-chain dehydrogenase/reductase SDR
3-Oxoacyl (Acyl-carrier protein) reductase {ECO:0000313|EMBL:ACL05598.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
PLM1_100_b1_sep16_scaffold_23_4
Streptomyces sp. NRRL B-1568, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3110..3562
DNA (453bp) protein (151aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035F9104
UPF0336 protein VR41_13410 {ECO:0000256|HAMAP-Rule:MF_00799}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL B-1568.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_23_5
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3562..3990
DNA (429bp) protein (143aa)
MaoC family protein Tax=Streptomyces sp. e14 RepID=D6KB03_9ACTO
MaoC family protein {ECO:0000313|EMBL:EFF92534.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
dehydratase
PLM1_100_b1_sep16_scaffold_23_6
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4036..5430
DNA (1395bp) protein (465aa)
Uncharacterized protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RMW4_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG05152.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_100_b1_sep16_scaffold_23_7
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5437..6684)
DNA (1248bp) protein (416aa)
Aspartate aminotransferase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BQR0_STRBB
Aminotransferase class I and II {ECO:0000313|EMBL:AKG43503.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
aspC1; aspartate aminotransferase
PLM1_100_b1_sep16_scaffold_23_trna_1
unknown

Not on your lists

6880..6952
DNA (73bp)
transferRNA Trp
PLM1_100_b1_sep16_scaffold_23_8
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6996..7319
DNA (324bp) protein (108aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037BA106
secE; putative preprotein translocase SecE subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_100_b1_sep16_scaffold_23_9
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7400..8143
DNA (744bp) protein (248aa)
transcription antitermination protein NusG Tax=Salinispora pacifica RepID=UPI00037C6C33
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_100_b1_sep16_scaffold_23_10
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8252..8686
DNA (435bp) protein (145aa)
50S ribosomal protein L11 Tax=Streptomyces scabrisporus RepID=UPI00035CAD1A
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_100_b1_sep16_scaffold_23_11
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8760..9485
DNA (726bp) protein (242aa)
50S ribosomal protein L1 Tax=Modestobacter marinus (strain BC501) RepID=I4F3V1_MODMB
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_100_b1_sep16_scaffold_23_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9599..10426
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAX8_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB45941.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_23_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10580..11440
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAX8_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB45941.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_23_14
Rhodococcus sp. P27, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


11745..12362
DNA (618bp) protein (206aa)
50S ribosomal protein L10 Tax=Rhodococcus RepID=RL10_RHOE4
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. P27.;"
PLM1_100_b1_sep16_scaffold_23_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12436..12819
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2K6_CATAD
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_100_b1_sep16_scaffold_23_16
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13192..14328
DNA (1137bp) protein (379aa)
ABC transporter ATP-binding protein Tax=Actinopolymorpha alba RepID=UPI000367E16E
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY99876.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_23_17
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14329..15105
DNA (777bp) protein (259aa)
ABC transporter permease Tax=Streptomyces RepID=UPI00037320E4
ABC transporter permease {ECO:0000313|EMBL:KDS87086.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
ABC transporter permease
PLM1_100_b1_sep16_scaffold_23_18
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15102..15932
DNA (831bp) protein (277aa)
ABC transporter integral membrane protein Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RMV2_BLASD
ABC transporter
ABC transporter integral membrane protein {ECO:0000313|EMBL:CCG05140.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
PLM1_100_b1_sep16_scaffold_23_19
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15937..17241
DNA (1305bp) protein (435aa)
mammalian cell entry protein Tax=Streptomyces chartreusis RepID=UPI000262F7B6
Uncharacterized protein {ECO:0000313|EMBL:EPJ41869.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
mce-related protein
PLM1_100_b1_sep16_scaffold_23_20
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17241..18269
DNA (1029bp) protein (343aa)
Mce-related protein Tax=Streptomyces auratus AGR0001 RepID=J1RQ88_9ACTO
mce-related protein
Mce-related protein {ECO:0000313|EMBL:AJT69745.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM1_100_b1_sep16_scaffold_23_21
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18266..19237
DNA (972bp) protein (324aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036C51B1
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWM15530.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
mce-related protein
PLM1_100_b1_sep16_scaffold_23_22
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19237..20472
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003613C91
Putative mce-related protein {ECO:0000313|EMBL:EAQ00177.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
virulence factor Mce family protein
PLM1_100_b1_sep16_scaffold_23_23
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20469..21647
DNA (1179bp) protein (393aa)
mammalian cell entry protein Tax=Streptomyces sp. CNS615 RepID=UPI00037FA730
Mammalian cell entry protein {ECO:0000313|EMBL:KDS87080.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
mce-related protein
PLM1_100_b1_sep16_scaffold_23_24
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21644..22909
DNA (1266bp) protein (422aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00037EFD91
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDN74160.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
mce-related protein
PLM1_100_b1_sep16_scaffold_23_25
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22929..23417
DNA (489bp) protein (163aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI0003600231
Uncharacterized protein {ECO:0000313|EMBL:EPJ41875.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_23_26
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23427..24170
DNA (744bp) protein (248aa)
Putative uncharacterized protein Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X4X7_STRVR
Putative uncharacterized protein {ECO:0000313|EMBL:EFL31715.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_23_27
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24635..28075
DNA (3441bp) protein (1147aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
DNA-directed RNA polymerase subunit beta Tax=Micromonospora RepID=C4RBP7_9ACTO
DNA-directed RNA polymerase subunit beta
PLM1_100_b1_sep16_scaffold_23_28
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28164..32054
DNA (3891bp) protein (1297aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
DNA-directed RNA polymerase subunit beta'''' Tax=Frankia sp. Iso899 RepID=UPI0003B54750
DNA-directed RNA polymerase subunit beta'
PLM1_100_b1_sep16_scaffold_23_29
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32215..32655
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4XBQ3_SALTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABP56360.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
Displaying items 1-30 of 102 in total

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