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PLM1_100_b1_sep16_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_40_1
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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3..593
DNA (591bp) protein (197aa)
Methyltransferase Tax=Micromonospora sp. ATCC 39149 RepID=C4RM53_9ACTO
Methyltransferase {ECO:0000313|EMBL:EEP75054.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_40_2
unknown

Not on your lists

comp(654..977)
DNA (324bp) protein (108aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_40_3
unknown

Not on your lists

comp(974..1219)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_40_4
unknown

Not on your lists

comp(1260..1553)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_40_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2125..4203)
DNA (2079bp) protein (693aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00036A828B
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:ACZ84979.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_40_6
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4200..5759)
DNA (1560bp) protein (520aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI00035DE20E
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACZ84980.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_40_7
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5772..6125)
DNA (354bp) protein (118aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI000360C12F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP60242.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_100_b1_sep16_scaffold_40_8
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6135..6542)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI00034D762D
Uncharacterized protein {ECO:0000313|EMBL:EKT77732.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_40_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6593..7336
DNA (744bp) protein (248aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00037E2B8B
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACZ84985.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_40_10
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7485..8651)
DNA (1167bp) protein (389aa)
Beta-lactamase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAI0_THECD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACY98893.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_40_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8665..9576)
DNA (912bp) protein (304aa)
hypothetical protein Tax=Actinomadura flavalba RepID=UPI000367245A
cyclase family protein
Cyclase family protein {ECO:0000313|EMBL:ACZ84987.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_40_12
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9573..11063)
DNA (1491bp) protein (497aa)
hypothetical protein Tax=Streptomyces rapamycinicus RepID=UPI000383039D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP60229.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_100_b1_sep16_scaffold_40_13
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11060..12124)
DNA (1065bp) protein (355aa)
luciferase Tax=Nocardiopsis potens RepID=UPI0003450859
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP60247.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_100_b1_sep16_scaffold_40_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12278..13390
DNA (1113bp) protein (371aa)
Amidohydrolase 2 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCH5_SPHWW
amidohydrolase 2
Amidohydrolase 2 {ECO:0000313|EMBL:ABQ69991.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
PLM1_100_b1_sep16_scaffold_40_15
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13611..14666
DNA (1056bp) protein (352aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000376770F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP60235.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_100_b1_sep16_scaffold_40_16
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14685..15377)
DNA (693bp) protein (231aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI00034601B8
TetR family transcriptional regulator
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ85040.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_40_17
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15496..16650
DNA (1155bp) protein (385aa)
acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:ACZ85041.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ACZ85041.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Acetyl-CoA C-acyltransferase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AW88_STRRD
PLM1_100_b1_sep16_scaffold_40_18
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16727..17140
DNA (414bp) protein (138aa)
NUDIX hydrolase Tax=Salinispora arenicola RepID=UPI000372C48E
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABP54442.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_100_b1_sep16_scaffold_40_19
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17161..18210)
DNA (1050bp) protein (350aa)
2-nitropropane dioxygenase Tax=Salinispora arenicola RepID=UPI0003663555
2-nitropropane dioxygenase
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:ABV98641.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_100_b1_sep16_scaffold_40_20
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18207..18917)
DNA (711bp) protein (237aa)
CoA-transferase Tax=Salinispora pacifica RepID=UPI00036852C6
coenzyme A transferase
Coenzyme A transferase {ECO:0000313|EMBL:ABP55050.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_100_b1_sep16_scaffold_40_21
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18914..19792)
DNA (879bp) protein (293aa)
CoA-transferase Tax=Salinispora arenicola RepID=UPI00036CD0D9
coenzyme A transferase
Coenzyme A transferase {ECO:0000313|EMBL:ABV98639.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_100_b1_sep16_scaffold_40_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19794..20549)
DNA (756bp) protein (252aa)
Putative enoyl-CoA hydratase/isomerase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AW97_STRRD
enoyl-CoA hydratase/isomerase
Putative enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACZ85050.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_40_23
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20614..21414
DNA (801bp) protein (267aa)
Short chain dehydrogenase Tax=Rhodococcus triatomae BKS 15-14 RepID=M2XJV4_9NOCA
Short chain dehydrogenase {ECO:0000313|EMBL:EME23918.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
short chain dehydrogenase
PLM1_100_b1_sep16_scaffold_40_24
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21442..22344
DNA (903bp) protein (301aa)
Short-chain dehydrogenase/reductase SDR Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AW99_STRRD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACZ85052.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_40_25
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22419..24698)
DNA (2280bp) protein (760aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI000370D8F6
Membrane protein {ECO:0000313|EMBL:EWM18441.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_40_26
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24833..25135
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
urease subunit gamma (EC:3.5.1.5)
Urease subunit gamma Tax=Frankia sp. QA3 RepID=I8QUQ7_9ACTO
PLM1_100_b1_sep16_scaffold_40_27
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25132..25446
DNA (315bp) protein (105aa)
ureB; urease subunit beta (EC:3.5.1.5)
Urease subunit beta {ECO:0000255|HAMAP-Rule:MF_01954}; EC=3.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01954};; Urea amidohydrolase subunit beta {ECO:0000255|HAMAP-Rule:MF_01954}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
urease subunit beta Tax=Frankia sp. BMG5.12 RepID=UPI0003748ACB
PLM1_100_b1_sep16_scaffold_40_28
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25439..27157
DNA (1719bp) protein (573aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
ureC; urease subunit alpha (EC:3.5.1.5)
Urease subunit alpha Tax=Frankia sp. QA3 RepID=I9A315_9ACTO
PLM1_100_b1_sep16_scaffold_40_29
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27157..27987
DNA (831bp) protein (277aa)
Urease accessory protein ureF Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B2K7_FRADG
urease accessory protein ureF
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_100_b1_sep16_scaffold_40_30
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27977..28747
DNA (771bp) protein (257aa)
Urease accessory protein UreG Tax=Actinoplanes sp. N902-109 RepID=R4LM81_9ACTO
urease accessory protein UreG
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
Displaying items 1-30 of 66 in total

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