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PLM1_100_b1_sep16_scaffold_64

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_64_1
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

135..539
DNA (405bp) protein (135aa)
superoxide dismutase Tax=Mycobacterium sp. 141 RepID=UPI00036C5246
Superoxide dismutase, Ni {ECO:0000313|EMBL:CDO23738.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
putative nickel-containing superoxide dismutase
PLM1_100_b1_sep16_scaffold_64_2
Streptomyces katrae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

550..1194
DNA (645bp) protein (215aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003672ABD
Phosphoglycerate mutase {ECO:0000313|EMBL:KJY27919.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces katrae.;"
phosphoglycerate mutase
PLM1_100_b1_sep16_scaffold_64_3
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1191..1772
DNA (582bp) protein (194aa)
GCN5-related N-acetyltransferase Tax=Micromonospora RepID=D9TCV5_MICAI
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63192.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
GCN5-like N-acetyltransferase
PLM1_100_b1_sep16_scaffold_64_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1831..2382
DNA (552bp) protein (184aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACG4_THECD
putative anti-sigma regulatory factor, serine/threonine protein kinase
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ACY99223.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_100_b1_sep16_scaffold_64_5
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2379..3230
DNA (852bp) protein (284aa)
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily Tax=Frankia sp. (strain EuI1c) RepID=E3IV06_FRASU
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily {ECO:0000313|EMBL:ADP78886.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_100_b1_sep16_scaffold_64_6
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3253..3711)
DNA (459bp) protein (153aa)
hypothetical protein Tax=Micromonospora sp. CNB394 RepID=UPI0003679CEE
Putative uncharacterized protein {ECO:0000313|EMBL:EEP71516.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_64_7
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3725..4633
DNA (909bp) protein (303aa)
DeoR family transcriptional regulator Tax=Micromonospora sp. CNB394 RepID=UPI00037E9D6E
diacylglycerol kinase catalytic subunit
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ADL48745.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_64_8
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4905..5156
DNA (252bp) protein (84aa)
WhiB family transcriptional regulator Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEAC7
wblE1; putative WhiB family transcriptional regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM1_100_b1_sep16_scaffold_64_9
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5250..6725)
DNA (1476bp) protein (492aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037BF593
histidine kinase dimerization/phosphoacceptor
Histidine kinase dimerization/phosphoacceptor {ECO:0000313|EMBL:AEB47083.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_64_10
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7020..8177
DNA (1158bp) protein (386aa)
8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:ACY99229.1}; EC=2.3.1.47 {ECO:0000313|EMBL:ACY99229.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
8-amino-7-oxononanoate synthase Tax=Actinomadura flavalba RepID=UPI000381AF54
PLM1_100_b1_sep16_scaffold_64_11
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8218..9135)
DNA (918bp) protein (306aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
hypothetical protein Tax=Nocardiopsis potens RepID=UPI000346FA2F
murQ; N-acetylmuramic acid-6-phosphate etherase
PLM1_100_b1_sep16_scaffold_64_12
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9229..10263)
DNA (1035bp) protein (345aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate transaminase (Isomerizing) {ECO:0000313|EMBL:ADD44817.1}; EC=2.6.1.16 {ECO:0000313|EMBL:ADD44817.1};; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
Glutamine--fructose-6-phosphate transaminase (Isomerizing) Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QBS8_STANL
PLM1_100_b1_sep16_scaffold_64_13
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10316..11254)
DNA (939bp) protein (313aa)
sugar ABC transporter permease Tax=Streptomyces sp. HmicA12 RepID=UPI000375AF1B
Uncharacterized protein {ECO:0000313|EMBL:EST19497.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
ABC transporter inner membrane proteint
PLM1_100_b1_sep16_scaffold_64_14
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11251..12186)
DNA (936bp) protein (312aa)
Sugar ABC transporter permease Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HF98_9PSEU
Sugar ABC transporter permease {ECO:0000313|EMBL:EOD59061.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
sugar ABC transporter permease
PLM1_100_b1_sep16_scaffold_64_15
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12233..13507)
DNA (1275bp) protein (425aa)
Extracellular solute-binding protein family 1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WGQ4_ACTMD
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACU34370.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_100_b1_sep16_scaffold_64_16
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13772..14536
DNA (765bp) protein (255aa)
GntR family transcriptional regulator Tax=Streptomyces vitaminophilus RepID=UPI000367F6EF
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABK52324.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_100_b1_sep16_scaffold_64_17
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14545..15549)
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2WTE4_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EME52051.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
PLM1_100_b1_sep16_scaffold_64_18
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15621..16361
DNA (741bp) protein (247aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
dethiobiotin synthase (EC:6.3.3.3)
ATP-dependent dethiobiotin synthetase BioD Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACH3_THECD
PLM1_100_b1_sep16_scaffold_64_19
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16364..17356
DNA (993bp) protein (331aa)
bioB; biotin synthase (EC:2.8.1.6)
Biotin synthase {ECO:0000255|HAMAP-Rule:MF_01694}; EC=2.8.1.6 {ECO:0000255|HAMAP-Rule:MF_01694};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
biotin synthase Tax=Actinomadura atramentaria RepID=UPI0003704638
PLM1_100_b1_sep16_scaffold_64_20
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17405..17896
DNA (492bp) protein (164aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI000380018B
Putative acetyltransferase {ECO:0000313|EMBL:EHR49535.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
N-acetyltransferase GCN5
PLM1_100_b1_sep16_scaffold_64_21
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17896..18078
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6HHM9_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB35019.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_64_22
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18075..18611
DNA (537bp) protein (179aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI000379DF53
Molybdenum cofactor biosysynthesis protein {ECO:0000313|EMBL:KJY33957.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_64_23
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18615..18830)
DNA (216bp) protein (72aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HHN3_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL92520.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_100_b1_sep16_scaffold_64_24
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19155..19502)
DNA (348bp) protein (116aa)
Anti-sigma factor Tax=Micromonospora RepID=D9TCX3_MICAI
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:ADL48760.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_64_25
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19499..20302)
DNA (804bp) protein (268aa)
RNA polymerase sigma factor Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S1I6_ACTS5
RNA polymerase sigma-E factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_100_b1_sep16_scaffold_64_26
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20411..20890
DNA (480bp) protein (160aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000373A810
transcriptional regulator
PLM1_100_b1_sep16_scaffold_64_27
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21010..21708)
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F9X8_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB47089.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
PLM1_100_b1_sep16_scaffold_64_28
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21654..21836)
DNA (183bp) protein (61aa)
Transcriptional regulator WhiB Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBE3_9ACTO
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
transcription factor whib
PLM1_100_b1_sep16_scaffold_64_29
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22201..23022)
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4F2W1_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH89974.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM1_100_b1_sep16_scaffold_64_30
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23145..24365
DNA (1221bp) protein (407aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Saccharopolyspora spinosa RepID=UPI0002379488
hypothetical protein
Displaying items 1-30 of 65 in total

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