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PLM1_100_b1_sep16_scaffold_356

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_356_1
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1..1833
DNA (1833bp) protein (611aa)
sarcosine dehydrogenase Tax=Streptomyces rapamycinicus RepID=UPI0003830908
glycine cleavage T protein (aminomethyl transferase)
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:AHH96538.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_100_b1_sep16_scaffold_356_2
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1859..2971
DNA (1113bp) protein (371aa)
Putative ring hydroxylating dioxygenase subunit Tax=Streptomyces scabies (strain 87.22) RepID=C9YX98_STRSW
ring hydroxylating dioxygenase subunit
Putative ring hydroxylating dioxygenase subunit {ECO:0000313|EMBL:CBG67878.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
PLM1_100_b1_sep16_scaffold_356_3
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2968..4173
DNA (1206bp) protein (402aa)
sarcosine oxidase subunit beta Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00035F4780
Sarcosine oxidase, beta subunit family protein {ECO:0000313|EMBL:EKX69024.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
soxB; sarcosine oxidase subunit beta
PLM1_100_b1_sep16_scaffold_356_4
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4188..4466
DNA (279bp) protein (93aa)
sarcosine oxidase subunit delta Tax=Amycolatopsis nigrescens RepID=UPI00038249F4
Sarcosine oxidase subunit delta {ECO:0000313|EMBL:KJY24026.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
sarcosine oxidase subunit delta
PLM1_100_b1_sep16_scaffold_356_5
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4463..7237
DNA (2775bp) protein (925aa)
Putative Sarcosine oxidase subunit alpha Tax=Streptomyces afghaniensis 772 RepID=S4MPH3_9ACTO
Putative Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EPJ35332.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
ferredoxin
PLM1_100_b1_sep16_scaffold_356_6
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7230..7868
DNA (639bp) protein (213aa)
Putative sarcosine oxidase gamma subunit Tax=Streptomyces scabies (strain 87.22) RepID=C9YXA3_STRSW
Sarcosine oxidase subunit gamma {ECO:0000313|EMBL:KFF98695.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
soxG; sarcosine oxidase subunit gamma
PLM1_100_b1_sep16_scaffold_356_7
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7888..8412
DNA (525bp) protein (175aa)
Phosphoglycerate mutase family protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KQE7_9ACTO
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EKX62812.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_356_8
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8462..9283)
DNA (822bp) protein (274aa)
ketose-bisphosphate aldolase (EC:4.1.2.13)
Tagatose-bisphosphate aldolase Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3AT33_STRMB
Tagatose-bisphosphate aldolase {ECO:0000313|EMBL:EME96757.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
PLM1_100_b1_sep16_scaffold_356_9
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9366..10274)
DNA (909bp) protein (303aa)
hypothetical protein Tax=Streptomyces vitaminophilus RepID=UPI000375F03E
phosphosugar isomerase-like protein
Phosphosugar isomerase-like protein {ECO:0000313|EMBL:AIJ26210.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_100_b1_sep16_scaffold_356_10
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10399..11094
DNA (696bp) protein (232aa)
alkaline phosphatase Tax=Nonomuraea coxensis RepID=UPI00035C9591
Alkaline phosphatase {ECO:0000313|EMBL:EXU68283.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PRh5.;"
DeoR family transcriptional regulator
PLM1_100_b1_sep16_scaffold_356_11
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11272..12345)
DNA (1074bp) protein (358aa)
Peptidase S8/S53, subtilisin kexin sedolisin (EC:3.4.21.-)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00038218D2
Alkaline serine exoprotease A {ECO:0000313|EMBL:EMD29816.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
PLM1_100_b1_sep16_scaffold_356_12
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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12898..13902
DNA (1005bp) protein (335aa)
Putative Predicted transcriptional regulator Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JNW1_STREN
transcriptional regulator
Putative Predicted transcriptional regulator {ECO:0000313|EMBL:CCB73052.1}; Transcriptional regulator, TrmB {ECO:0000313|EMBL:AEW92695.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_100_b1_sep16_scaffold_356_13
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13957..14991)
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026265DA
hydrolase
Hydrolase {ECO:0000313|EMBL:AIJ21660.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM1_100_b1_sep16_scaffold_356_14
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15188..16651
DNA (1464bp) protein (488aa)
Carotenoid cleavage dioxygenase Tax=Amycolatopsis mediterranei RepID=D8I3J2_AMYMU
carotenoid cleavage dioxygenase
Carotenoid cleavage dioxygenase {ECO:0000313|EMBL:AEK45611.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_100_b1_sep16_scaffold_356_15
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16648..17838
DNA (1191bp) protein (397aa)
acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:ACZ84527.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ACZ84527.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000362B581
PLM1_100_b1_sep16_scaffold_356_16
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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17835..18779
DNA (945bp) protein (315aa)
Oxidoreductase Tax=Amycolatopsis mediterranei RepID=D8I3I9_AMYMU
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AEK45608.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_100_b1_sep16_scaffold_356_17
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18900..19856
DNA (957bp) protein (319aa)
TRAP transporter solute receptor Tax=Streptomyces sp. Mg1 RepID=B4UYN8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK46406.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_356_18
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19726..21240)
DNA (1515bp) protein (505aa)
Histidine kinase Tax=Streptomyces sp. Mg1 RepID=B4UYN9_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK46405.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
integral membrane sensor signal transduction histidine kinase
PLM1_100_b1_sep16_scaffold_356_19
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21248..21913)
DNA (666bp) protein (222aa)
Two component transcriptional regulator Tax=Streptomyces sp. Mg1 RepID=B4UYP0_9ACTO
Two component transcriptional regulator {ECO:0000313|EMBL:EDX20232.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
Two-component system response regulator
PLM1_100_b1_sep16_scaffold_356_20
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22033..24087
DNA (2055bp) protein (685aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037A2D2E
TRAP transporter, 4TM/12TM fusion protein
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ADB30037.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_356_21
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24084..25073
DNA (990bp) protein (330aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00035C6DBF
TRAP transporter solute receptor, TAXI family
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:ADB30038.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_100_b1_sep16_scaffold_356_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25155..25808
DNA (654bp) protein (218aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AV57_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ88708.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_100_b1_sep16_scaffold_356_23
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25908..26654)
DNA (747bp) protein (249aa)
Peptidase M23 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7G5_GEOOG
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:ADB73465.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_100_b1_sep16_scaffold_356_24
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26992..27903)
DNA (912bp) protein (304aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003760414
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62106.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_356_25
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28149..29750
DNA (1602bp) protein (534aa)
ABC transporter related protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SF70_GEOOG
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB74760.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_100_b1_sep16_scaffold_356_26
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29868..30641
DNA (774bp) protein (258aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036630D6
echA12; enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ADI11272.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_100_b1_sep16_scaffold_356_27
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30704..32611
DNA (1908bp) protein (636aa)
ABC transporter related protein Tax=Micromonospora sp. (strain L5) RepID=E8S853_MICSL
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ADL47815.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_100_b1_sep16_scaffold_356_28
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32617..33672)
DNA (1056bp) protein (352aa)
Uncharacterized protein Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QDT2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN77414.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
SC9H11.08; hypothetical protein
PLM1_100_b1_sep16_scaffold_356_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33832..34113)
DNA (282bp) protein (94aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI00035DBAF9
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:EXG80153.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative PAS/PAC sensor protein
Displaying 29 items

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