ggKbase home page

PLM4_90_b1_sep16_scaffold_4080

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_4080_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..244
DNA (243bp) protein (81aa)
translation elongation factor Tu; K02358 elongation factor Tu bin=bin5_DeltaP species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
translation elongation factor Tu
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_4080_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


267..575
DNA (309bp) protein (103aa)
30S ribosomal protein S10 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJE0_DESAR
30S ribosomal protein S10
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_4080_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


665..1288
DNA (624bp) protein (208aa)
50S ribosomal protein L3 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
50S ribosomal protein L3
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_4080_4
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1302..1925
DNA (624bp) protein (208aa)
50S ribosomal protein L4 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL4_SYNAS
50S ribosomal protein L4
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b1_sep16_scaffold_4080_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1922..2212
DNA (291bp) protein (97aa)
50S ribosomal protein L23 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037F3D1F
rplW; 50S ribosomal protein L23
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_4080_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2295..3110
DNA (816bp) protein (272aa)
50S ribosomal protein L2 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=RL2_GEOLS
rplB; 50S ribosomal protein L2
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_4080_7
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3110..3403
DNA (294bp) protein (98aa)
30S ribosomal protein S19 Tax=Bilophila RepID=E5Y772_BILWA
30S ribosomal protein S19
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_4080_8
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3419..3757
DNA (339bp) protein (113aa)
50S ribosomal protein L22 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RL22_ALKOO
rplV; 50S ribosomal protein L22
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM4_90_b1_sep16_scaffold_4080_9
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3774..4436
DNA (663bp) protein (221aa)
30S ribosomal protein S3 Tax=Geobacter metallireducens RepID=RS3_GEOMG
30S ribosomal protein S3
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_4080_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4601..4912
DNA (312bp) protein (104aa)
50S ribosomal protein L16 Tax=Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) RepID=D3SQ08_THEAH
50S ribosomal protein L16
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_4080_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4909..5109
DNA (201bp) protein (67aa)
50S ribosomal protein L29 Tax=Lactobacillus delbrueckii RepID=RL29_LACDA
50S ribosomal protein L29
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_4080_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5193..5510
DNA (318bp) protein (106aa)
30S ribosomal protein S17 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJD0_DESAR
30S ribosomal protein S17
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_4080_13
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5598..5966
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Geobacter metallireducens RepID=RL14_GEOMG
rplN; 50S ribosomal protein L14
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_4080_14
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6042..6371
DNA (330bp) protein (110aa)
50S ribosomal protein L24 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
50S ribosomal protein L24
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_4080_15
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6380..6919
DNA (540bp) protein (180aa)
50S ribosomal protein L5 Tax=Geobacter uraniireducens (strain Rf4) RepID=RL5_GEOUR
rplE; 50S ribosomal protein L5
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_4080_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7059..7592
DNA (534bp) protein (178aa)
30S ribosomal protein S8 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=RS8_CALS8
30S ribosomal protein S8
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_4080_17
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7756..8292
DNA (537bp) protein (179aa)
50S ribosomal protein L6 bin=GWF2_Methylomirabilis_70_14 species=Slackia heliotrinireducens genus=Slackia taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplF; 50S ribosomal protein L6
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_4080_18
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8379..8588
DNA (210bp) protein (70aa)
50S ribosomal protein L18-like protein Tax=Paenibacillus larvae RepID=UPI0001F85A0D
rplR; 50S ribosomal protein L18
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 18 items

View Taxonomy