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PLM4_90_b1_sep16_scaffold_1336

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_1336_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..508)
DNA (507bp) protein (169aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2N0_DESTA
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_1336_2
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(686..1537)
DNA (852bp) protein (284aa)
Putative uncharacterized protein Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y1H8_9FIRM
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_1336_3
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1550..2263)
DNA (714bp) protein (238aa)
LivF Tax=Clostridium kluyveri RepID=A5N0V6_CLOK5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH07485.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
PLM4_90_b1_sep16_scaffold_1336_4
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2260..3030)
DNA (771bp) protein (257aa)
ABC transporter ATP-binding protein Tax=Methylobacterium sp. WSM2598 RepID=UPI000363BC00
livG2; high-affinity branched-chain amino acid transporter ATP-binding protein LivG
High-affinity branched-chain amino acid transport ATP-binding protein LivG {ECO:0000313|EMBL:AFV12563.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
PLM4_90_b1_sep16_scaffold_1336_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3027..3974)
DNA (948bp) protein (316aa)
Branched chain amino acid ABC transporter inner membrane protein Tax=Comamonas testosteroni ATCC 11996 RepID=H1RXD1_COMTE
ABC branched chain amino acid family transporter, inner membrane subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_90_b1_sep16_scaffold_1336_6
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3971..4909)
DNA (939bp) protein (313aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002F5D889
Branched chain amino acid ABC transporter inner membrane protein {ECO:0000313|EMBL:CED73437.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae.;"
inner-membrane translocator
PLM4_90_b1_sep16_scaffold_1336_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4934..6070)
DNA (1137bp) protein (379aa)
branched-chain amino acid ABC transporter substrate-binding protein Tax=Comamonas testosteroni RepID=UPI00036F75B5
branched chain amino acid ABC transporter periplasmic ligand-binding protein
Branched chain amino acid ABC transporter periplasmic ligand-binding protein {ECO:0000313|EMBL:EHN63047.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
PLM4_90_b1_sep16_scaffold_1336_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6254..6802)
DNA (549bp) protein (183aa)
Putative transcriptional regulator Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0Q3_DESTA
putative transcriptional regulator
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_1336_9
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7096..7914
DNA (819bp) protein (273aa)
Cytosine deaminase-like metal-dependent hydrolase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C0R1_DESTA
Enamidase {ECO:0000313|EMBL:KJR97516.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
cytosine deaminase-like metal-dependent hydrolase
PLM4_90_b1_sep16_scaffold_1336_10
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7856..8248
DNA (393bp) protein (131aa)
Amidohydrolase family protein Tax=delta proteobacterium NaphS2 RepID=D8F9P4_9DELT
Amidohydrolase family protein {ECO:0000313|EMBL:EFK07495.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
cytosine deaminase-like metal-dependent hydrolase
PLM4_90_b1_sep16_scaffold_1336_11
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8321..9850
DNA (1530bp) protein (510aa)
4Fe-4S binding domain protein Tax=delta proteobacterium NaphS2 RepID=D8F9P3_9DELT
Contig_41, whole genome shotgun sequence {ECO:0000313|EMBL:KIX11976.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
dissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit
PLM4_90_b1_sep16_scaffold_1336_12
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9908..10489
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Bradyrhizobium sp. WSM1253 RepID=I2QAP1_9BRAD
Protein of unknown function (DUF1185)
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_1336_13
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10631..11431
DNA (801bp) protein (267aa)
Methylmalonate-semialdehyde dehydrogenase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I5X5_CALAS
mmsA; methylmalonate-semialdehyde dehydrogenase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_1336_14
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11464..12057
DNA (594bp) protein (198aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase Tax=Sulfolobus solfataricus RepID=Q97YT9_SULSO
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_1336_15
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12101..13363
DNA (1263bp) protein (421aa)
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA delta-isomerase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LN12_SYNFM
4-hydroxyphenylacetate 3-hydroxylase
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_b1_sep16_scaffold_1336_16
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13336..13494
DNA (159bp) protein (53aa)
HpaB: predicted 4-hydroxyphenylacetate 3-hydroxylase Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NI12_DESTT
4-hydroxyphenylacetate 3-hydroxylase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_90_b1_sep16_scaffold_1336_17
RLO_PLX_64_10, Bacteria

Not on your lists

13501..14601
DNA (1101bp) protein (367aa)
Mandelate racemase/muconate lactonizing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFT7_9BACT
mandelate racemase/muconate lactonizing family protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_90_b1_sep16_scaffold_1336_18
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14782..15738
DNA (957bp) protein (319aa)
NAD-dependent epimerase/dehydratase Tax=Methanolobus psychrophilus R15 RepID=K4MFL7_9EURY
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_1336_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15932..16078)
DNA (147bp) protein (49aa)
Cysteine-rich domain protein Tax=delta proteobacterium NaphS2 RepID=D8FAD1_9DELT
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 19 items

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