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PLM4_90_b1_sep16_scaffold_1902

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_1902_1

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comp(2..385)
DNA (384bp) protein (128aa)
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein (EC:1.6.99.5)
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RG98_DESPD
Marine sediment metagenome DNA, contig: S06H3_L00105 {ECO:0000313|EMBL:GAI04243.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_90_b1_sep16_scaffold_1902_2
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(741..1655)
DNA (915bp) protein (305aa)
Putative NADPH-dependent FMN reductase Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU70_CLOSD
putative NADPH-dependent FMN reductase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_1902_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1702..2670)
DNA (969bp) protein (323aa)
Inner-membrane translocator bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_1902_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2670..3557)
DNA (888bp) protein (296aa)
ABC-type transporter, integral membrane subunit bin=GWA2_Methylomirabilis_73_35 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_1902_5
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3577..4287)
DNA (711bp) protein (237aa)
ABC transporter, ATP-binding protein Tax=delta proteobacterium NaphS2 RepID=D8F6G4_9DELT
ABC transporter-like protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_1902_6
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4281..5012)
DNA (732bp) protein (244aa)
ABC transporter related protein Tax=Desulfovibrio fructosivorans JJ RepID=E1JXZ5_DESFR
ABC transporter
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_1902_7
unknown

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comp(5218..5457)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_1902_8
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5485..6681)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. ORS 375 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_1902_9
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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7118..7366
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YLD6_9BACT
phytochrome sensor protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_b1_sep16_scaffold_1902_10
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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7441..8028
DNA (588bp) protein (196aa)
Sigma54 specific transcriptional regulator, Fis family Tax=Desulfovibrio sp. X2 RepID=S7V291_9DELT
sigma-54 dependent DNA-binding response regulator
Tax=BJP_IG2069_Desfulfarculales_53_13
Displaying 10 items

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