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PLM4_90_b1_sep16_scaffold_22477

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_22477_trna_1
unknown

Not on your lists

comp(154..227)
DNA (74bp)
transferRNA Arg
PLM4_90_b1_sep16_scaffold_22477_1
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(301..561)
DNA (261bp) protein (87aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_22477_2
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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805..1086
DNA (282bp) protein (94aa)
Putative uncharacterized protein bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM4_90_b1_sep16_scaffold_22477_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1070..1318
DNA (249bp) protein (83aa)
Helix-turn-helix protein, CopG family bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
CopG family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_22477_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1346..2473)
DNA (1128bp) protein (376aa)
geranylgeranyl reductase bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
bchP-like; geranylgeranyl hydrogenase related
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_22477_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2604..3143)
DNA (540bp) protein (180aa)
sugar transferase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sugar transferase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 6 items

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