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PLM4_90_b1_sep16_scaffold_12579

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_12579_1
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..520)
DNA (519bp) protein (173aa)
Proton-translocating NADH-quinone oxidoreductase, chain N bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
NADH dehydrogenase (quinone)
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_12579_2
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(517..804)
DNA (288bp) protein (96aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L bin=GWF2_Nitrospirae_44_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
NADH-quinone oxidoreductase subunit J
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM4_90_b1_sep16_scaffold_12579_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(788..1261)
DNA (474bp) protein (158aa)
Putative monovalent cation/H+ antiporter subunit B bin=GWF2_Nitrospirae_44_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
mnhB; Na(+)/H(+) anitporter subunit MhnB
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_12579_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1258..1530)
DNA (273bp) protein (91aa)
MnhB: predicted Na(+)/H(+) anitporter, subunit B (Mnh complex subunit B) bin=GWF2_Nitrospirae_44_13 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
mnhB; Na(+)/H(+) anitporter subunit MhnB
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_12579_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1527..1772)
DNA (246bp) protein (82aa)
Conserved uncharacterized protein, associated with Mnh complex bin=GWF2_Nitrospirae_44_13 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cation:proton antiporter
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_12579_6
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1769..2101)
DNA (333bp) protein (111aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit bin=GWD2_Nitrospirae-related_57_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
phaG; monovalent cation/H+ antiporter subunit G
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_12579_7
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2101..2367)
DNA (267bp) protein (89aa)
MnhF: Na(+)/H(+) anitporter, subunit F (Mnh complex subunit F) bin=GWF2_Nitrospirae_44_13 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
mnhF; Na(+)/H(+) anitporter subunit MhnF
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_12579_8
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2369..2854)
DNA (486bp) protein (162aa)
Na+/H+ ion antiporter subunit bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
cation antiporter
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_12579_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2982..3290)
DNA (309bp) protein (103aa)
potassium uptake protein
Potassium uptake protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_49_23_curated
Displaying 9 items

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