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PLM4_90_b1_sep16_scaffold_7512

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_7512_1
unknown

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comp(1..96)
DNA (96bp) protein (32aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_7512_2
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

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495..596
DNA (102bp) protein (34aa)
hypothetical protein bin=bin7_NC10_sister species=Thauera sp. 27 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
PLM4_90_b1_sep16_scaffold_7512_3
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

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693..1088
DNA (396bp) protein (132aa)
PilT protein domain protein bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
PilT domain-containing protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
PLM4_90_b1_sep16_scaffold_7512_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1432..2007
DNA (576bp) protein (192aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] bin=GWC2_NOV_55_46 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
radical SAM domain-containing protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_7512_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2007..2738
DNA (732bp) protein (244aa)
Radical SAM domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CXE6_9BACT
radical SAM protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_7512_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2750..2941
DNA (192bp) protein (64aa)
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_7512_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2938..3579
DNA (642bp) protein (214aa)
cytochrome c biogenesis protein bin=bin5_DeltaP species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
cytochrome c-type biogenesis protein CcsB
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_7512_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3707..5047
DNA (1341bp) protein (447aa)
glutamyl-tRNA reductase
Glutamyl-tRNA reductase bin=GWC2_Pelobacter_58_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_7512_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5037..5984
DNA (948bp) protein (316aa)
Porphobilinogen deaminase bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hemC; porphobilinogen deaminase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_7512_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5988..6278
DNA (291bp) protein (97aa)
Uroporphyrinogen-III C-methyltransferase bin=GWD2_Nitrospirae-related_57_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hemD; bifunctional uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 10 items

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