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PLM4_90_b1_sep16_scaffold_190

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_190_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(286..870)
DNA (585bp) protein (195aa)
Putative UbiX-like carboxylase subunit (Fragment) Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWD5_9FIRM
ubiX; UbiX-like carboxylase subunit encoded in anaerobic phenol operon
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_190_2
unknown

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comp(904..1023)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_190_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1251..2441)
DNA (1191bp) protein (397aa)
Acetyl-CoA acetyltransferase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDK8_DESTA
acetyl-CoA acetyltransferase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_190_4
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2472..3146)
DNA (675bp) protein (225aa)
Transcriptional regulator, TetR family Tax=Desulfitobacterium hafniense DP7 RepID=G9XU17_DESHA
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_190_5
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(3244..5592)
DNA (2349bp) protein (783aa)
Putative carbon monoxide dehydrogenase subunit L protein bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dehydrogenase/reductase
Tax=RBG_16_Chloroflexi_50_9_curated
PLM4_90_b1_sep16_scaffold_190_6

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comp(5602..6087)
DNA (486bp) protein (162aa)
Marine sediment metagenome DNA, contig: S12H4_L03980 {ECO:0000313|EMBL:GAI86087.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein bin=GWF2_Syntrophobacterales_56_9 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
CoxS; aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
PLM4_90_b1_sep16_scaffold_190_7
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6197..7087)
DNA (891bp) protein (297aa)
Carbon monoxide dehydrogenase medium chain bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
CoxM; aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_190_8
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7464..8216
DNA (753bp) protein (251aa)
5-carboxymethyl-2-hydroxymuconatedelta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconateDelta-isomerase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYW5_METFV
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b1_sep16_scaffold_190_9
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8232..9017
DNA (786bp) protein (262aa)
Oxidoreductase, short-chain dehydrogenase/reductase family Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=Q39TK3_GEOMG
short-chain dehydrogenase/reductase family oxidoreductase
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b1_sep16_scaffold_190_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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9208..10203
DNA (996bp) protein (332aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E34A1
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_90_b1_sep16_scaffold_190_11
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10200..11246
DNA (1047bp) protein (349aa)
Alcohol dehydrogenase GroES domain protein bin=GWC2_Syntrophus__56_31 species=uncultured marine bacterium 1n22 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
alcohol dehydrogenase GroES domain-containing protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b1_sep16_scaffold_190_12
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11289..12566
DNA (1278bp) protein (426aa)
Putative peptidase M24 bin=GWC2_Syntrophus__56_31 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
metallopeptidase, family M24
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b1_sep16_scaffold_190_13
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12645..13856
DNA (1212bp) protein (404aa)
Extracellular ligand-binding receptor bin=GWC2_Syntrophus__56_31 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
putative Leu/Ile/Val-binding periplasmic (PBP) ABC transporter protein
Tax=RBG_13_Deltaproteobacteria_53_10_curated
PLM4_90_b1_sep16_scaffold_190_14
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14095..14358
DNA (264bp) protein (88aa)
Uncharacterized protein bin=GWC2_Syntrophus__56_31 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWC2_Syntrophus_56_31_curated
PLM4_90_b1_sep16_scaffold_190_15
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14558..16918
DNA (2361bp) protein (787aa)
athL; pyrogallol hydroxytransferase large subunit AthL (EC:1.97.1.2)
Pyrogallol hydroxytransferase large subunit AthL Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LBW7_THEPS
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_190_16
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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16915..17481
DNA (567bp) protein (189aa)
Cna B domain protein Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FV02_DESHD
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66543.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
Cna B domain-containing protein
Displaying 16 items

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