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PLM4_90_b1_sep16_scaffold_873

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_873_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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111..986
DNA (876bp) protein (292aa)
Sensor histidine kinase, HAMP domain-containing Tax=Geobacter metallireducens RepID=Q39X22_GEOMG
sensor histidine kinase, HAMP domain-containing
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_873_2

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1218..1634
DNA (417bp) protein (139aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI00030F3BC4
Marine sediment metagenome DNA, contig: S01H1_S01261 {ECO:0000313|EMBL:GAF97085.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_873_3
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1978..3354
DNA (1377bp) protein (459aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3K1_GEODF
histidine kinase
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_873_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3750..4142
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVH6_DESAC
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_873_5
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4171..4827
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YCZ7_9BACT
pilW; protein PilW
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_873_6
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4859..5404
DNA (546bp) protein (182aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037FADE2
Tfp pilus assembly protein PilX-like protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_873_7
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5418..8441
DNA (3024bp) protein (1008aa)
Type IV pilin biogenesis protein, putative Tax=Geobacter metallireducens RCH3 RepID=H1LAD4_GEOME
pilY1-2; type IV pilus assembly protein PilY
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM4_90_b1_sep16_scaffold_873_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8456..8812
DNA (357bp) protein (119aa)
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_873_9
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8817..9773
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8C7_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
PLM4_90_b1_sep16_scaffold_873_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9798..10220
DNA (423bp) protein (141aa)
Pilin assembly protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVV8_SYNAS
pilin assembly protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_90_b1_sep16_scaffold_873_11
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10918..11286
DNA (369bp) protein (123aa)
General secretion pathway protein H bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
fimT; protein FimT
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
Displaying 11 items

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