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PLM4_90_b1_sep16_scaffold_2148

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_2148_1
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..830)
DNA (828bp) protein (276aa)
Putative glutaconate CoA-transferase, alpha subunit bin=GWF2_Syntrophobacterales_56_9 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
3-oxoadipate:succinyl-CoA transferase subunit A
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2148_2
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(874..1575)
DNA (702bp) protein (234aa)
ABC transporter related bin=GWF2_Methylomirabilis_70_14 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2148_3
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1582..2316)
DNA (735bp) protein (245aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1X9_DESTA
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2148_4
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2285..3253)
DNA (969bp) protein (323aa)
ABC-type transporter, integral membrane subunit bin=GWA2_Methylomirabilis_73_35 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amino acid ABC transporter
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2148_5
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3359..4009)
DNA (651bp) protein (217aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid ABC transporter
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2148_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4020..5210)
DNA (1191bp) protein (397aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SI13_THEM7
amino acid ABC transporter substrate-binding protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2148_7
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5363..6058)
DNA (696bp) protein (232aa)
GntR domain protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SUS9_9DELT
transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_2148_8
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

Not on your lists

6356..6763
DNA (408bp) protein (136aa)
hypothetical protein Tax=Blautia producta RepID=UPI00037C698A
hypothetical protein
Tax=RBG_16_Chloroflexi_48_7_curated
PLM4_90_b1_sep16_scaffold_2148_9
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6829..7662)
DNA (834bp) protein (278aa)
Short-chain dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dehydrogenase with different specificities
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_b1_sep16_scaffold_2148_10

Not on your lists

comp(7774..8478)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein Tax=delta proteobacterium NaphS2 RepID=D8F6G4_9DELT bin=RBG2 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
Marine sediment metagenome DNA, contig: S03H2_L04840 {ECO:0000313|EMBL:GAH43002.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_2148_11
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8483..9202)
DNA (720bp) protein (240aa)
High-affinity branched-chain amino acid transport ATP-binding protein Tax=environmental samples RepID=Q649D1_9ARCH bin=RBG2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacillariophyta tax=RBG2 organism_group=Chloroflexi
ABC transporter
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM4_90_b1_sep16_scaffold_2148_12
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9189..9698)
DNA (510bp) protein (170aa)
High-affinity branched-chain amino acid transport ATP-binding protein braF (Modular protein) Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGD2_9BRAD bin=RBG2 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
ABC transporter permease
Tax=BJP_IG2069_Desfulfarculales_53_13
Displaying 12 items

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