ggKbase home page

PLM4_90_b1_sep16_scaffold_6352

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_6352_1
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60..467)
DNA (408bp) protein (136aa)
Ribonuclease VapC Tax=Leptolyngbya sp. PCC 6406 RepID=L8LCV5_9CYAN
twitching motility protein PilT
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_6352_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(476..715)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Leptolyngbya sp. PCC 6406 RepID=L8LFG7_9CYAN
hypothetical protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_6352_3
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(1341..1841)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1D8_9BACT
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_90_b1_sep16_scaffold_6352_4
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1838..2092)
DNA (255bp) protein (85aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IGG5_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB60810.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
PLM4_90_b1_sep16_scaffold_6352_5
unknown

Not on your lists

comp(2306..2467)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_6352_6
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2443..2685)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SR10_9DELT
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_90_b1_sep16_scaffold_6352_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(2751..2957)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SR11_9DELT
hypothetical protein
Tax=CG_Nitrosp_01
PLM4_90_b1_sep16_scaffold_6352_8
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3066..3419)
DNA (354bp) protein (118aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Oscillatoria nigro-viridis genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_6352_9
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3420..3716)
DNA (297bp) protein (99aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003750F43
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_6352_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(3829..4026)
DNA (198bp) protein (66aa)
id=4489733 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=CG_Nitrosp_01
PLM4_90_b1_sep16_scaffold_6352_11
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4396..4590)
DNA (195bp) protein (65aa)
Protein containing HEPN domain Tax=sediment metagenome RepID=D9PJA2_9ZZZZ
hypothetical protein
Tax=CG_Desulfarul_01
PLM4_90_b1_sep16_scaffold_6352_12
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(4577..4870)
DNA (294bp) protein (98aa)
Protein containing Nucleotidyltransferase domain Tax=sediment metagenome RepID=D9PJA3_9ZZZZ
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
Displaying 12 items

View Taxonomy