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PLM4_90_b1_sep16_scaffold_1807

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_1807_1
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..807)
DNA (807bp) protein (269aa)
putative alpha-amylase (EC:3.2.1.1)
Alpha-amylase bin=GWC2_Syntrophobacterales_56_13 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(820..2103)
DNA (1284bp) protein (428aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_3
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2298..3320)
DNA (1023bp) protein (341aa)
Amylo-alpha-1,6-glucosidase bin=GWC2_Syntrophobacterales_56_13 species=unknown genus=Bilophila taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
glycogen debranching protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_4
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3377..4207)
DNA (831bp) protein (277aa)
Glyen debranching enzyme bin=GWC2_Syntrophus__56_31 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Glycogen debranching enzyme
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_5
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4331..4969)
DNA (639bp) protein (213aa)
Outer membrane lipoprotein carrier protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
outer membrane lipoprotein carrier protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_6
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5311..5751)
DNA (441bp) protein (147aa)
Branched-chain-amino-acid aminotransferase Tax=uncultured bacterium RepID=K1XN22_9BACT
branched-chain amino acid aminotransferase
Tax=GWC2_Syntrophus_56_31_curated
PLM4_90_b1_sep16_scaffold_1807_7
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5694..6389)
DNA (696bp) protein (232aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_8
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6442..7971)
DNA (1530bp) protein (510aa)
ATPase related to magnesium chelatase subunit bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
ATPase related to magnesium chelatase subunit
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8166..8645
DNA (480bp) protein (160aa)
Molybdenum cofactor biosynthesis protein C bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
moaC; molybdenum cofactor biosynthesis protein c
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8773..9234)
DNA (462bp) protein (154aa)
Cache domain protein Tax=Desulfovibrio sp. U5L RepID=I2Q6E6_9DELT
cache sensor protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_90_b1_sep16_scaffold_1807_11
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9616..10143
DNA (528bp) protein (176aa)
Hypothetical membrane protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM4_90_b1_sep16_scaffold_1807_12
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10189..10503
DNA (315bp) protein (105aa)
Bacterial regulatory protein, Fis family Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRK0_SYNAS
Fis family transcriptional regulator
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_1807_13
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10487..11746
DNA (1260bp) protein (420aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23)
UDP-N-acetylglucosamine pyrophosphorylase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM4_90_b1_sep16_scaffold_1807_14
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11783..12673
DNA (891bp) protein (297aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing) bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=CG_Delta_05
Displaying 14 items

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