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PLM4_90_b1_sep16_scaffold_7033

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_7033_1
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1040)
DNA (1038bp) protein (346aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase Tax=Syntrophus aciditrophicus (strain SB) RepID=SYL_SYNAS
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_7033_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1080..1535)
DNA (456bp) protein (152aa)
N utilization substance protein B homolog bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
transcription termination factor NusB
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_7033_3
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1714..2178)
DNA (465bp) protein (155aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=BJP_IG2102_Syntrophobacterales_60_12
PLM4_90_b1_sep16_scaffold_7033_4
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2253..3455)
DNA (1203bp) protein (401aa)
GTP cyclohydrolase II (EC:3.5.4.25 4.1.2.-)
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM4_90_b1_sep16_scaffold_7033_5
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3461..4099)
DNA (639bp) protein (213aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_7033_6
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4140..4610)
DNA (471bp) protein (157aa)
Transcriptional repressor NrdR bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
nrdR; NrdR family transcriptional regulator
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM4_90_b1_sep16_scaffold_7033_7
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4607..5104)
DNA (498bp) protein (166aa)
deoxycytidylate deaminase (EC:3.5.4.12)
CMP/dCMP deaminase zinc-binding protein bin=GWC2_Syntrophus__56_31 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Syntroph_01
PLM4_90_b1_sep16_scaffold_7033_8
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5114..5587)
DNA (474bp) protein (158aa)
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_7033_9
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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6156..6452
DNA (297bp) protein (99aa)
Tax=RBG_16_Gamma2_64_10_curated
PLM4_90_b1_sep16_scaffold_7033_10
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6680..6916)
DNA (237bp) protein (79aa)
Acyl carrier protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
acyl carrier protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM4_90_b1_sep16_scaffold_7033_11
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7307..7843)
DNA (537bp) protein (179aa)
Zinc finger protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
zinc finger protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM4_90_b1_sep16_scaffold_7033_12
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8032..9444
DNA (1413bp) protein (471aa)
Glutamate--tRNA ligase 1 {ECO:0000255|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000255|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase 1 {ECO:0000255|HAMAP-Rule:MF_00022}; Short=GluRS 1 {ECO:0000255|HAMAP-Rule:MF_00022};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Glutamate--tRNA ligase 1 Tax=Syntrophus aciditrophicus (strain SB) RepID=SYE1_SYNAS
glutamyl glutaminyl-tRNA synthetase
PLM4_90_b1_sep16_scaffold_7033_trna_1
unknown

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9513..9584
DNA (72bp)
transferRNA Glu
PLM4_90_b1_sep16_scaffold_7033_13

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comp(9566..10189)
DNA (624bp) protein (208aa)
Lipolytic protein G-D-S-L family (Fragment) Tax=uncultured bacterium RepID=F8UVU4_9BACT
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:AEI30212.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lipolytic protein G-D-S-L family
Displaying 14 items

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