ggKbase home page

PLM4_90_b1_sep16_scaffold_601

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_601_1
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178..1446
DNA (1269bp) protein (423aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003655E52
hypothetical protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_601_2
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1439..2731
DNA (1293bp) protein (431aa)
hypothetical protein bin=bin3_NC10 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_601_3
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2771..3526
DNA (756bp) protein (252aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23)
UDP-N-acetylglucosamine pyrophosphorylase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_601_4
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3517..4488
DNA (972bp) protein (324aa)
tRNA-dihydrouridine synthase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
tRNA-dihydrouridine synthase
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_601_5
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4710..4937
DNA (228bp) protein (76aa)
Hypothetical cytosolic protein bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein
Tax=GWC2_Syntrophus_56_31_curated
PLM4_90_b1_sep16_scaffold_601_6
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4959..5237
DNA (279bp) protein (93aa)
Hypothetical cytosolic protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
cytoplasmic protein
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_601_7
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5618..7183
DNA (1566bp) protein (522aa)
Ribonuclease Y bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
hydrolase
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM4_90_b1_sep16_scaffold_601_8
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7195..7980
DNA (786bp) protein (262aa)
Calcineurin-like phosphoesterase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
calcineurin-like phosphoesterase
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_601_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8100..9383
DNA (1284bp) protein (428aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_601_16S_1
unknown

Not on your lists

9802..10599
DNA (798bp)
16S ribosomal RNA (16S rRNA)
Displaying 10 items

View Taxonomy