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PLM4_90_b1_sep16_scaffold_3249

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_3249_1
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(184..546)
DNA (363bp) protein (121aa)
UPF0331 protein Tax=Smithella sp. ME-1 RepID=V4GUK7_9DELT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM4_90_b1_sep16_scaffold_3249_2
R_NC10_66_22, NC10, Bacteria

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comp(536..841)
DNA (306bp) protein (102aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003662BFF
DNA polymerase subunit beta
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_90_b1_sep16_scaffold_3249_3
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1017..1823)
DNA (807bp) protein (269aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Glutamate racemase Tax=Sulfuricella denitrificans skB26 RepID=S6ALZ2_9PROT
PLM4_90_b1_sep16_scaffold_3249_4
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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2044..3093
DNA (1050bp) protein (350aa)
Predicted permease bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
permease
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_3249_5
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3150..4148)
DNA (999bp) protein (333aa)
Phosphate/sulphate permease Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LS52_SYNAS
phosphate/sulphate permease
Tax=CG_Desulfob_01
PLM4_90_b1_sep16_scaffold_3249_6
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4169..4789)
DNA (621bp) protein (207aa)
Phosphate transport regulator Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LS53_SYNAS
phosphate transport regulator
Tax=CG_Desulfob_01
PLM4_90_b1_sep16_scaffold_3249_7
unknown

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4964..5401
DNA (438bp) protein (146aa)

This feature has no annotations

PLM4_90_b1_sep16_scaffold_3249_8
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5527..6501)
DNA (975bp) protein (325aa)
D-alanine--D-alanine ligase domain protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
D-alanine--D-alanine ligase
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_3249_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6686..7585)
DNA (900bp) protein (300aa)
D-alanine--D-alanine ligase bin=GWC2_Syntrophus__56_31 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
D-alanine--D-alanine ligase
Tax=CG_Delta_05
PLM4_90_b1_sep16_scaffold_3249_10
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7595..8905)
DNA (1311bp) protein (437aa)
L-lysine 2,3-aminomutase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
lysine 2,3-aminomutase YodO family protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM4_90_b1_sep16_scaffold_3249_11
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9130..9870
DNA (741bp) protein (247aa)
Formamidopyrimidine-DNA glycosylase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
formamidopyrimidine-DNA glycosylase
Tax=RBG_13_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_3249_12
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9929..10078)
DNA (150bp) protein (50aa)
Hypothetical membrane protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LY18_SYNAS
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:ABC78982.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
Displaying 12 items

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