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PLM1_100_coex_sep16_scaffold_603

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_603_1
unknown

Not on your lists

comp(1..351)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_603_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(533..2350)
DNA (1818bp) protein (606aa)
Amino acid permease-associated region bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
trkD; potassium transport protein Kup
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_100_coex_sep16_scaffold_603_3
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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2522..3004
DNA (483bp) protein (161aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI0003761320
hypothetical protein
Tax=RBG_16_Zixibacteria_40_9_curated
PLM1_100_coex_sep16_scaffold_603_4
R_NC10_66_22, NC10, Bacteria

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3027..3644
DNA (618bp) protein (206aa)
alkaline phosphatase Tax=Streptomyces sp. LaPpAH-108 RepID=UPI0003780B2C
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_100_coex_sep16_scaffold_603_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3698..4669)
DNA (972bp) protein (324aa)
aceA; isocitrate lyase (EC:2.7.8.23)
Isocitrate lyase bin=GWC2_Methylomirabilis_70_16 species=Haladaptatus paucihalophilus genus=Haladaptatus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_603_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4831..5055)
DNA (225bp) protein (75aa)
id=14430569 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_100_coex_sep16_scaffold_603_7
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5291..6643)
DNA (1353bp) protein (451aa)
Sigma-54 factor interaction domain-containing protein Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VVJ0_DESAO
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADU63548.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
PLM1_100_coex_sep16_scaffold_603_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6689..8047)
DNA (1359bp) protein (453aa)
primary replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase bin=GWC2_Methylomirabilis_70_16 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_603_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(8050..8493)
DNA (444bp) protein (148aa)
50S ribosomal protein L9 bin=GWC2_Methylomirabilis_70_16 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplI; 50S ribosomal protein L9
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_603_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8774..9184)
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein bin=GWC2_Methylomirabilis_70_24 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_603_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(9184..9528)
DNA (345bp) protein (115aa)
30S ribosomal protein S6 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpsF; 30S ribosomal protein S6
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_603_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9695..10372)
DNA (678bp) protein (226aa)
60 kDa chaperonin bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
groEL; molecular chaperone GroEL
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 12 items

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