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PLM1_100_coex_sep16_scaffold_1435

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_coex_sep16_scaffold_1435_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3..677)
DNA (675bp) protein (225aa)
drug/metabolite transporter bin=bin7_NC10_sister species=Desulfovibrio piger genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1435_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

701..1159
DNA (459bp) protein (153aa)
cyclase/dehydrase bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cyclase/dehydrase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1435_3
Streptomyces albus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1074..2033)
DNA (960bp) protein (320aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000371A665
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI87885.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces albus J1074.;"
PLM1_100_coex_sep16_scaffold_1435_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2124..2786
DNA (663bp) protein (221aa)
Transcriptional regulator, TetR family bin=GWF2_Methylomirabilis_70_14 species=Burkholderia thailandensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
bacterial regulatory s, tetR family protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_100_coex_sep16_scaffold_1435_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

2779..3636
DNA (858bp) protein (286aa)
apurinic endonuclease Apn1 (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative endonuclease IV (EC:3.1.21.2)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_1435_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3646..4293)
DNA (648bp) protein (216aa)
Endonuclease III bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Endonuclease III
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_100_coex_sep16_scaffold_1435_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4290..5024)
DNA (735bp) protein (245aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1435_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5119..5580
DNA (462bp) protein (154aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_100_coex_sep16_scaffold_1435_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

5577..5954
DNA (378bp) protein (126aa)
glyoxalase/bleomycin resistance protein/dioxygenase bin=bin7_NC10_sister species=Pandoraea sp. SD6-2 genus=Pandoraea taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
lactoylglutathione lyase
Tax=CSP1_6_Rokubacteria
PLM1_100_coex_sep16_scaffold_1435_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5941..6393)
DNA (453bp) protein (151aa)
id=4810589 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1435_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6498..6677)
DNA (180bp) protein (60aa)
id=4810590 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_100_coex_sep16_scaffold_1435_12
unknown

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comp(6674..6871)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_100_coex_sep16_scaffold_1435_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(6868..7080)
DNA (213bp) protein (71aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter membrane protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Displaying 13 items

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