ggKbase home page

PLM0_60_b1_sep16_scaffold_1527

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_1527_1
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10..1017)
DNA (1008bp) protein (336aa)
Alanine racemase domain protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PEJ6_9DELT
Alanine racemase domain protein {ECO:0000313|EMBL:EPX62815.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Alanine racemase, N-terminal domain family
PLM0_60_b1_sep16_scaffold_1527_2
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(1052..1435)
DNA (384bp) protein (128aa)
Translation initiation inhibitor, putative Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AF38_PYRYC
translation initiation inhibitor
Translation initiation inhibitor, putative {ECO:0000313|EMBL:AEH24885.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus yayanosii (strain CH1 / JCM 16557).;"
PLM0_60_b1_sep16_scaffold_1527_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(1432..2781)
DNA (1350bp) protein (450aa)
amino acid transporter Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B614F8
putative permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM0_60_b1_sep16_scaffold_1527_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2821..4026)
DNA (1206bp) protein (402aa)
6-phosphogluconolactonase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08Y47_STIAD
Lactonase, 7-bladed beta propeller
Lactonase, 7-bladed beta propeller {ECO:0000313|EMBL:AHG91839.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1527_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4031..5452)
DNA (1422bp) protein (474aa)
Dihydroorotase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM59_KORVE
D-glutamate deacylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM0_60_b1_sep16_scaffold_1527_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5476..7449)
DNA (1974bp) protein (658aa)
Oligopeptide transporter, OPT family protein Tax=Rhodanobacter sp. 115 RepID=I4WF87_9GAMM
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:AHG88509.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
oligopeptide transporter, OPT family
PLM0_60_b1_sep16_scaffold_1527_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7532..8248)
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQ22_GRAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91575.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1527_8
unknown

Not on your lists

comp(8299..8604)
DNA (306bp) protein (102aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_1527_9
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8629..9024)
DNA (396bp) protein (132aa)
hypothetical protein Tax=Janthinobacterium sp. CG3 RepID=UPI0003455D72
Uncharacterized protein {ECO:0000313|EMBL:CDD98179.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_1527_10
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9742..10125)
DNA (384bp) protein (128aa)
hypothetical protein bin=bin8_Chloro species=Actinopolymorpha alba genus=Actinopolymorpha taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
amino acid-binding ACT protein
Tax=RBG_16_Planctomycetes_64_10_curated
PLM0_60_b1_sep16_scaffold_1527_11
unknown

Not on your lists

comp(10177..10392)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_1527_12
unknown

Not on your lists

comp(10482..11096)
DNA (615bp) protein (205aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_1527_13

Not on your lists

comp(11096..11929)
DNA (834bp) protein (278aa)
beta-lactamase (EC:3.5.2.6)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037CB8D6
BJP_beta_lactamase {ECO:0000313|EMBL:AIA10847.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM0_60_b1_sep16_scaffold_1527_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11952..12818
DNA (867bp) protein (289aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI0003817712
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88149.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1527_15
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12815..13339
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R7Z3_PELHB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJV26453.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
PLM0_60_b1_sep16_scaffold_1527_16
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13356..14477
DNA (1122bp) protein (374aa)
Glycosyl hydrolase, family 88 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT35_KORVE
glycosyl hydrolase
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:ABF39965.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM0_60_b1_sep16_scaffold_1527_17
unknown

Not on your lists

comp(14513..15580)
DNA (1068bp) protein (356aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_1527_18
unknown

Not on your lists

15629..16225
DNA (597bp) protein (199aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_1527_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16497..17927)
DNA (1431bp) protein (477aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B1_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM0_60_b1_sep16_scaffold_1527_20
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17966..18559)
DNA (594bp) protein (198aa)
Beta-glucosidase (EC:3.2.1.21)
Beta-hexosaminidase Tax=Cystobacter fuscus DSM 2262 RepID=S9R6Q2_9DELT
Beta-hexosaminidase {ECO:0000313|EMBL:EPX64683.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
PLM0_60_b1_sep16_scaffold_1527_21
unknown

Not on your lists

18838..19380
DNA (543bp) protein (181aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_1527_22
unknown

Not on your lists

comp(20124..21584)
DNA (1461bp) protein (487aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_1527_23
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21784..22224)
DNA (441bp) protein (147aa)
Putative sodium/dicarboxylate symporter Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7F9_GEMAT
putative sodium/dicarboxylate symporter
Putative sodium/dicarboxylate symporter {ECO:0000313|EMBL:BAH38169.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Displaying 23 items

View Taxonomy