ggKbase home page

PLM0_60_b1_sep16_scaffold_3688

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_3688_1

Not on your lists

3..338
DNA (336bp) protein (112aa)
Marine sediment metagenome DNA, contig: S03H2_L03393 {ECO:0000313|EMBL:GAH41499.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM0_60_b1_sep16_scaffold_3688_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(390..1277)
DNA (888bp) protein (296aa)
mmsB; 3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:BAH39744.1}; EC=1.1.1.31 {ECO:0000313|EMBL:BAH39744.1};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
3-hydroxyisobutyrate dehydrogenase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAE6_GEMAT
PLM0_60_b1_sep16_scaffold_3688_3
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1277..2179)
DNA (903bp) protein (301aa)
Beta-lactamase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNK7_STIAD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ADO68086.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM0_60_b1_sep16_scaffold_3688_4
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2176..3594)
DNA (1419bp) protein (473aa)
Metabolite MFS transporter Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09BF9_STIAD
Metabolite MFS transporter
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM0_60_b1_sep16_scaffold_3688_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3631..4422)
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J149_DEIGD
Uncharacterized protein {ECO:0000313|EMBL:AKF11768.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
protein of unknown function DUF218
PLM0_60_b1_sep16_scaffold_3688_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(4427..5056)
DNA (630bp) protein (210aa)
Putative transmembrane protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFZ7_ANASK
protein of unknown function DUF4126
Uncharacterized protein {ECO:0000313|EMBL:AHG88677.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_3688_7
unknown

Not on your lists

comp(5135..5518)
DNA (384bp) protein (128aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_3688_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5549..5992
DNA (444bp) protein (148aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI00037CCECB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AHG88237.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_3688_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5995..6519)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Q2_GEMAT
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG88002.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 9 items

View Taxonomy