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PLM0_60_b1_sep16_scaffold_1313_22

Organism: PLM0_60_b1_sep16_Gemmatimonadetes_KBS708_61_15

near complete RP 41 / 55 MC: 4 BSCG 43 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(20375..20950)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 177.0
  • Bit_score: 194
  • Evalue 8.80e-47
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 180.0
  • Bit_score: 247
  • Evalue 1.90e-63
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG87845.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 180.0
  • Bit_score: 247
  • Evalue 9.40e-63

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 576
ATGGAGTTGGCTGCCTACGAGTCTCGGAGCTCGGTGAACGATATCCAACTGGTCACGCGGGTGGTTGCTGGCGATGCCGCCGCCGAGCGTGAGCTGTACGAGACATACGTCGATCGCATTTTCCGGCTGACGTTTCGTCTGGCGGGGGACGATGATCTCGCGCGGGATTTCACACAGGCAACCTTCATACGTGCGTTCGAAAAAATTGGAAGCTTTCGTGGCGATTCATCTCTCTCGACCTGGCTTCACTCGATCGGAGTATCGGTGGCACTGAACGGACTGCGGAAGACGAGGCGAATGAAGAATCGCGAAGCGCCGATGGAAGAAGGAATGACGGTAGGGGCAACGCCGAAGGAAGCGGAGCCCGACCTGAAGGAGAAGCTGGCGCGGGCAATCGACTCGCTGTCGGAGAAATACAGGACGGTATTCGTGATGCACGACGTAGAAGGCTACACGCACGAGGACATCAGCGGGACGCTCAACATTCCGATTGGAACGTCGAAGTCCCACCTCTTTCAGGCACGTAGCAAGCTGCGCGTCGCACTGGCCGAATTTGCACCGGAGTGGGTGTCATGA
PROTEIN sequence
Length: 192
MELAAYESRSSVNDIQLVTRVVAGDAAAERELYETYVDRIFRLTFRLAGDDDLARDFTQATFIRAFEKIGSFRGDSSLSTWLHSIGVSVALNGLRKTRRMKNREAPMEEGMTVGATPKEAEPDLKEKLARAIDSLSEKYRTVFVMHDVEGYTHEDISGTLNIPIGTSKSHLFQARSKLRVALAEFAPEWVS*